Volvox carteri f. nagariensis: VOLCADRAFT_106144
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Entry
VOLCADRAFT_106144 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
VOLCADRAFT_106144
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vcn01009
]
VOLCADRAFT_106144
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcn03021
]
VOLCADRAFT_106144
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_106144
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_106144
Enzymes [BR:
vcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
VOLCADRAFT_106144
Protein phosphatases and associated proteins [BR:
vcn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
VOLCADRAFT_106144
Transcription machinery [BR:
vcn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
VOLCADRAFT_106144
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
VOLCADRAFT_106144
Spliceosome [BR:
vcn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
VOLCADRAFT_106144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
9616897
NCBI-ProteinID:
XP_002953868
JGI:
106144
UniProt:
D8U5D0
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MDIAQVDEIIERLLDVRNGRPGKQVQLAENEIRLLCLTAKEIFMSQPNLLELEAPIKICG
DIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLSFKIKYPENFFLLRG
NHECASINRIYGFYDECKRRYNIRLWRTFTDCFNCLPVAALIDEKILCMHGGLSPELKSL
EQIKRITRPTDVPDSGLLCDLLWADPDKDIQGWGENDRGVSYTFGPDCVTEFLQKHDLDL
VCRAHQVVEEGYEFFAKRQLVTIFSAPNYCGEFENAGAMMSVDETLMCSFQILKPAETKQ
KGRR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggacattgcccaagttgatgaaattatcgagcggctgttggatgtgcggaatggcagg
ccaggcaagcaagtgcagctggctgaaaacgagattcgtctgctttgcctgacggccaag
gagatctttatgagccagcccaacctgctggaactggaggcgcctattaagatttgcggt
gatattcatggccagtattcagaccttttgcgactgtttgagtatggtggctttccccct
gaggcgaattatctgttcctcggggactatgtggaccgcggcaagcagagcctggagacc
atctgcttgctgctctcgttcaagattaagtacccggaaaacttcttcttgttgcggggg
aaccacgagtgcgcgtctattaaccgtatctacggtttctatgatgaatgcaagcggaga
tacaacatccgcctctggcgcacgttcacggactgcttcaattgcctacctgttgctgcc
cttatagatgagaagattctgtgcatgcacggtggcctatcccctgagctcaagtcgttg
gagcagattaagcgaatcacgcggccaacggacgttccggactcgggcttgctgtgcgac
ctgctctgggccgacccggacaaggatattcagggctggggcgagaacgaccgtggcgtg
tcctacacgttcgggccggattgtgtcacagaattcctgcaaaagcatgacctggacctc
gtctgtcgtgcgcaccaggttgttgaagagggttatgaattcttcgcaaaacggcagctc
gtgaccatcttctcagcgcccaactattgtggcgagttcgagaatgccggtgctatgatg
agtgtcgacgaaacgcttatgtgctctttccagatcctgaagccggccgagacaaaacag
aaaggacggcgctga
DBGET
integrated database retrieval system