Volvox carteri f. nagariensis: VOLCADRAFT_106246
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Entry
VOLCADRAFT_106246 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K07179
RIO kinase 2 [EC:
2.7.11.1
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VOLCADRAFT_106246
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vcn01001
]
VOLCADRAFT_106246
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcn03009
]
VOLCADRAFT_106246
Enzymes [BR:
vcn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
VOLCADRAFT_106246
Protein kinases [BR:
vcn01001
]
Serine/threonine kinases: Other
RIO family [OT]
VOLCADRAFT_106246
Ribosome biogenesis [BR:
vcn03009
]
Eukaryotic type
Pre-40S particles
Kinases
VOLCADRAFT_106246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIO1
Rio2_N
APH
Kdo
ABC1
Pkinase
OspG_kinase
Kinase-like
TCAD9
Castor_Poll_mid
Motif
Other DBs
NCBI-GeneID:
9617315
NCBI-ProteinID:
XP_002954071
JGI:
106246
UniProt:
D8U638
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MKLDVNALRYLSKDDFRVLTAVEMGQKNHELVPLELIDSISGLKHGGAFKSIKTLMRHKL
LHHDSKYYDGYRLTYMGYDFLAIRALVSRGHISGVGRQIGVGKESDIFEVTNDDGEVFAL
KLHRLGRTSFRAVKSKRDYLGRRQNYSWLYLSRLAALKEYAFMKALYEHGFPVPQAIDNN
RHAVLMGLVNARPMVQIRAMAHPARVYLSCMDLISRLAAKGLIHCDFNEFNLLINEDEEL
TLIDFPQMVSITHANAEELFTRDVECIIRFFSKKIGYVPEQDKSLPYVRPAFADVAAAAA
AAAAADGEGVLDVALEASGFQRQHQKVLEEYLAEVVEAGEDGDSGGEEGEEESEEEVTAE
GHLEAERRVANREAGGKEDGEEEGGGGGTSGREGKGRDVDGAGGVGSAAGLGEEDQEEAT
GESDVEDRLGRLAMGTAADGSPQRREIRSKRSGGGGGGGGEEDDEEEAGARSSDEAMSVK
SGAISDEGEDEDSASSCDDGDGGEGSRRRRSGGRECGGGHRAAAAGGGRRQRLGEHEVQQ
IVAAQRRKQGQRQAMSRASRNASKNSNKAGSRRGGGKSAGADGW
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaagctagatgtcaatgcgcttcgttatttgtctaaagatgacttccgcgttcttacg
gctgttgaaatgggccaaaagaatcacgagctcgttccattagagcttatagacagcatt
tctggactaaagcatggcggcgctttcaaaagcattaagacgctcatgcggcacaagctt
ttgcaccatgacagcaagtactatgatggatatcggctcacgtacatgggctatgatttc
ttggccatccgcgctctcgttagccgcgggcacattagcggtgtcggccgccaaattggc
gtcggcaaagagtcggacatcttcgaagtgacgaacgacgatggggaggtcttcgccctc
aaattgcatcgccttggccgcacgtctttccgcgctgtcaagtccaagcgcgattacctg
ggccggcgccagaactacagctggctgtacctcagccgactggccgcgctgaaggagtac
gccttcatgaaagcgctgtacgaacacggcttcccagttccccaggcgattgacaacaac
cgccacgcggttctgatgggactagttaacgcccgacccatggttcagatccgcgccatg
gcccaccccgcccgcgtgtacctctcctgcatggacctcatatcccgattggcggcgaag
ggactcatccactgcgacttcaacgaattcaacttgctcatcaatgaagatgaggagctg
accctcattgacttcccacaaatggtgtccatcactcacgcaaacgctgaggagctcttc
acgcgcgacgtcgagtgcatcatccgcttctttagcaagaaaatcggctatgtacctgag
caagacaagagcctgccgtacgtacgacccgcgtttgccgacgtggcggcggccgctgcc
gcggcggcagcggcggacggcgagggggtgttggatgtggcgttggaggcgagcgggttc
cagaggcagcatcagaaggtcctagaagagtatctggctgaagttgtggaggcaggggag
gacggggacagcggaggagaggagggtgaagaggaaagcgaggaggaggtgacggcggag
gggcatctagaggccgagcgacgtgtggcgaaccgagaagcggggggaaaggaggacggg
gaggaggagggagggggaggcggcactagcgggcgtgaaggcaaagggagagatgtggac
ggggctgggggggtgggcagcgctgctgggttgggcgaagaggaccaggaagaggcgacg
ggggagagtgatgtggaggaccggttggggcggttggcaatgggcacggcagcggacggg
tcaccgcagcgacgtgaaatacggagcaaacggagcggcggaggcggaggcggaggcggt
gaggaggacgacgaggaggaggcgggggccagatcatctgatgaggcgatgagcgtcaag
agcggcgcaataagtgatgagggggaggacgaggacagcgcgagtagctgtgatgacggc
gacggtggtgagggctcccggcggcggcggagcggcggtcgagaatgcggtgggggccat
cgggctgcagctgccggagggggccggcgtcaacgtcttggcgagcatgaggtgcagcag
attgtggcggcccaacgacgaaagcagggccagcggcaggccatgtcgcgagccagtcgc
aacgcctccaagaactccaacaaggccgggagccggaggggcggcggcaagtcggctggt
gcggatggctggtag
DBGET
integrated database retrieval system
