Volvox carteri f. nagariensis: VOLCADRAFT_106273
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Entry
VOLCADRAFT_106273 CDS
T01330
Symbol
spl5
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VOLCADRAFT_106273 (spl5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_106273 (spl5)
Spliceosome [BR:
vcn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
VOLCADRAFT_106273 (spl5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
9624026
NCBI-ProteinID:
XP_002954185
JGI:
106273
UniProt:
D8U697
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MATLAESFLADLEDLSEDEPGPETEQSEEEADDGMDDIEALNFDDLSAVAKLTSEPRYSD
VLQRVRAALSEAASTSTTGANGGDRRSSGPLEEDPTYKLLVECNRLAVDIDNEIAVVHNF
IRDKYRPKFPELESLVHHPLDYARVVQRIGNEMDLTLVPLDDMLPAATVMVVTVTATTTS
GKPLDDEALGRVMAGCDMAVQLDEDKRTILQFVESKMNQVAPNMSAVVGTEIAAKLMGVA
GGLLALSRMPACNIQSLGAKRKTLAGFSSTTTQPHQGFISGCPIVTQTPPSLRNKAIRLI
ASKSALLARKDAYGEDPSGTYGAAMKAEVVRKVEKWQEPPPAKQAKPLPVPDAEAKKRRG
GRRLRKMKERYGLTDMRKAANRMMFNQAEEEWVDGDDVIGLGVLGKEGSGRLRIVASQQK
QKLSAKAQKKFKARMYGSSGATSGLSSSLAFTPVQGIELENPSARFGMDLDTKDGTQSYF
SQFGGFRSVKK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcttgctgagagcttcctagcagacttggaagatctgtcagaggatgagccg
gggcctgagacagagcagtcggaggaggaagccgatgacgggatggacgacatcgaggcg
ctaaactttgacgacctctcggcagtggcaaagctcacgagcgaaccacggtacagcgac
gtcctccagcgagtacgtgcggctctgtctgaagccgcctccacctccaccaccggcgcc
aacgggggagatcggagatcctccgggcccctggaggaggatcccacgtacaagctactc
gtggagtgcaaccgccttgccgtcgacattgataacgaaattgccgtcgtacacaacttc
attcgcgacaagtaccgaccaaagtttccggaactggaatccctggttcaccacccgctg
gactatgcgcgtgtggttcagcgaattggcaatgagatggatttgacgttggtgccgttg
gacgatatgctgccggcggcaacggtcatggtagttacggttacagcaactaccacgtcg
ggcaagcccctggacgacgaggctctgggtcgggtgatggcgggatgcgacatggccgta
cagctggacgaggacaaacgcacgatattgcagtttgtggagagcaagatgaaccaggtg
gcccccaacatgtcggcggtggtgggcacggagattgcggccaagttgatgggtgtggcg
gggggcctgttggcgctgtctagaatgccggcgtgtaacattcagtccctgggcgccaag
cgcaagacgctagctgggttcagctccaccaccacccagccgcaccagggcttcatcagc
ggctgccccattgtgacccagacgcccccctccctgcgcaacaaggcgataaggctcatc
gcgtctaagagcgcactgctggcccgcaaagacgcatacggggaggacccatcgggcacc
tacggggcggccatgaaggcggaggtggtacggaaggtggagaagtggcaggagccgcca
cccgccaagcaggccaagccgctgccagtgcctgacgcggaggcgaaaaagcgacgcggg
ggccgaagacttcgaaagatgaaggagcgctacgggctaacggatatgcgcaaggcggcg
aatcggatgatgttcaaccaggcggaggaggagtgggtggacggagacgacgtcattggg
ttgggtgtgctgggcaaggagggcagcggcaggttgcgaatcgtggcgtcgcaacagaag
cagaagctcagcgccaaggcgcaaaagaagttcaaggcgcgaatgtacggcagcagcggc
gcgacgtccggtctgtcgtcatcgctggccttcacccctgtgcagggtattgagctggag
aacccctcggcgcgcttcggcatggatttggataccaaggacggcacgcagtcgtatttt
agccagttcgggggcttcaggtcggtcaagaagtaa
DBGET
integrated database retrieval system
