Volvox carteri f. nagariensis: VOLCADRAFT_106613
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Entry
VOLCADRAFT_106613 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K12351
sphingomyelin phosphodiesterase 2 [EC:
3.1.4.12
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn00600
Sphingolipid metabolism
vcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
VOLCADRAFT_106613
Enzymes [BR:
vcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
VOLCADRAFT_106613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
9621897
NCBI-ProteinID:
XP_002954957
JGI:
106613
UniProt:
D8U8M1
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MAPLQILTLNTWGLWLISKKRYNRILHLAEFLANDAQQKHKLDVVLLQEVWVDTDVRILA
SAAEQGGLSHCMHFRSGVFGSGLLTLSSQLDRTLSGSVAQIPFTAGDPASINCGDYLAAK
GVGWTRLATPSGPLDVFNTHLHANYSHKYGSSTGAQYGNRGAASPGAPNHDCIPPPAVDE
FAAFRMAQVLELARFVRHVTSSLASPSGGSSRPLGVVLGGDLNCEPHTLEAHVLRALLPR
LQDAWLETHGSLGDPSEADAAGHTCNANCSSFKPRRQRPSRIDYVFTTLRVVACELALQK
TPEGHSFSDHIAVQVRLELPSATAAAAAAVAAAAAPAEPLSPEHQQQAGAAARRVALLRA
ALGVLEEGAQRAAQASAGHVLFAVIMAVQVRRYRGRDGG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcacccttgcaaatcctcaccctcaatacgtggggtctttggctgatatccaagaaa
cgctacaatagaattcttcacctggcggagttcctcgcaaatgatgcgcaacaaaagcac
aagctggacgtggttcttctccaggaggtctgggtggacaccgacgtgcgcatccttgcc
tcagccgccgagcaggggggtctgagccactgcatgcacttccggtccggtgttttcgga
agcggactcctcactctgtccagtcagcttgaccgtacactctctggctctgttgcacaa
attccattcaccgcaggtgatccggcctccatcaattgtggtgactatctcgctgcgaaa
ggtgttggttggacccggttggcgaccccttccggtccgctggacgtgttcaatacgcac
ctgcacgctaattactcgcacaagtacgggagcagtacaggggcgcagtacggcaaccga
ggtgctgctagtcccggtgcgccgaaccacgactgcattccgccgcccgctgtggacgag
tttgcagcgttccgaatggcccaggttctggagctggcccgtttcgtacgacacgtcacc
agctcgcttgccagtcccagcggcggcagtagcaggccactgggggtggttcttggaggc
gacttgaactgcgaacctcataccctggaggcgcatgtgctgcgggctctcctgccccgc
cttcaagacgcctggctagagacccatgggtcgctaggggacccatccgaggccgatgct
gcgggccacacctgcaatgcgaactgcagcagcttcaagccccgcaggcagcggccctcc
cgcatcgactacgtgttcacgactcttcgagtggtagcctgtgagctagcgctccagaaa
acacccgaaggccactccttctccgaccatattgccgtacaagtccgtctggagctgccg
tcagctacagctgctgctgctgcggcagtagcagcagcagcagcacccgccgagccattg
tctccggagcaccagcagcaagcgggagctgcagcgcggcgtgttgcactgcttcgggcg
gccctaggggtactggaggagggcgcgcagcgagccgcacaagcatcagcggggcacgtg
ctctttgcggtcatcatggccgtacaggtacggcgctatcgagggcgagatggtggttga
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