Volvox carteri f. nagariensis: VOLCADRAFT_106903
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Entry
VOLCADRAFT_106903 CDS
T01330
Symbol
hsfA
Name
(RefSeq) heat shock transcription factor
KO
K09419
heat shock transcription factor, other eukaryote
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcn03000
]
VOLCADRAFT_106903 (hsfA)
Transcription factors [BR:
vcn03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
VOLCADRAFT_106903 (hsfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
DUF7801
APG6_N
Filament
CC_Liprin_beta
Motif
Other DBs
NCBI-GeneID:
9626484
NCBI-ProteinID:
XP_002955685
JGI:
106903
UniProt:
D8UAH4
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MTNPANQPPPFLIKTFIVWKPPEFARDLLPKHFKHNNFSSFVRQLNTYGFRKVDPDRWEF
ANEHFVRGKKEQLRGIHRRKPSSSQHHSHHHSGAGGINGTGGSAGAVAVPSNALIAAGTA
APAIEIGAYGGFQEEIDNLKRDKNLLMVELVRVRQQQAGTDAKMRDLQARLEATEAKQQT
MINMFAAAFKHPSVFQRMLSTMATGGVQRLANAPTYPSPVTNGGRRKRRARGESPLEMDL
GNGVGVNEVIDADMADHGSGGGAAGSPGGTGGGGDDTSSNGSASGLAMGAVTHQQLVQYN
PNAAGGDVLNDMMLRSFQTLLSTAEDVTGDVTGAFNSLAIGPQASAGTTVPVVTIHEQPC
GTSPALGGTSSSHEGLTNGVVAMSPLPLGSTAIQPYHAPHTLGLAGLAHGLEAAAATPQP
APLVDTTEAALIIPKPEPLTAHLLPVNGGLGMTVMPVHNGAAAVACNGAMPCAAGGTAPS
AAASAAGKPAAAAPMGTVVAVGPASASGAVGPAASLGSGPHVHTMIPIQSVTMAPPTQSM
PTGQPAPTGLPAIGSAATAAVAVAAVAAAAPSSTEASATVAASSMWTPVAAAVTPLVAAE
TAAAVRQPPLPVNDNPTVSSPDDEDDGMGLPVDLMHTLRSMASGELVLPEDGDFGDDVWA
HLMTAASAQPADGVSGLGMDLREIIPPSVLED
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatccagccaatcagccaccaccattcctcataaagactttcattgtatggaag
ccgccagagtttgcgcgggacttgttgcccaagcacttcaagcacaacaatttctccagt
tttgtccgacaactcaacacatacggcttccgcaaggtcgacccagatcgctgggagttc
gcaaacgaacactttgtccgtggcaagaaggagcaactgcgcggcattcaccgccgtaag
ccttccagcagccagcatcacagccaccaccatagcggcgccggcggcatcaatggcact
ggcggcagcgctggggccgttgcggtgccgagtaatgcgcttatcgcagccggaacggct
gcaccggccatcgagattggcgcatacggcggcttccaagaggagattgacaacctcaaa
cgcgacaagaatttgctaatggtggagctggtacgtgtacggcagcagcaggcgggtacg
gacgccaagatgcgggatttgcaggcacggctggaggcgactgaggcgaagcagcaaacc
atgattaatatgtttgcggcggcgtttaagcacccatcggtgtttcagcggatgttgtcc
accatggcgaccggcggtgtgcagcgcttggcgaatgcacccacgtacccatctccggtc
accaacgggggccgtaggaagcgccgggcgcgtggggagtcccccttggagatggacctg
ggcaatggtgtgggtgtgaatgaggtcattgatgcggacatggcggaccatggttccggt
ggcggcgccgccggctcaccgggcggtaccggcggcggcggcgacgacacgtcatccaac
ggctccgccagcggactggccatgggcgcggtgacgcaccagcagctggttcagtacaac
cctaatgcggcgggcggcgatgtgctgaacgacatgatgctgcgctcctttcagacactg
ctctctacggcagaggacgttacgggcgatgtgacgggcgctttcaacagtctggcgatt
gggccgcaggcctccgctggcactactgttcccgttgtgaccattcatgaacagccgtgc
gggacctcgccagccctggggggaacctcctccagtcatgaaggcctcacaaacggtgtg
gtggccatgtcacctttgccgctcggcagcacggccatccagccataccacgcgccgcat
actctagggttagcagggcttgcgcacgggttggaggcggcggcagcgacgccgcagccg
gccccgttggtcgacaccaccgaagccgcgctcatcattcccaagccagagcctctgacg
gcgcatctgctgccggtaaacgggggccttggtatgacggtcatgccggttcacaacgga
gctgctgccgtcgcctgcaacggagcgatgccctgtgccgccggcggcacagcaccgtca
gcggcggcgtctgccgccggcaagcccgccgccgcggcgccaatggggacagtggtggct
gtgggccccgcctctgcgtcgggtgccgtaggtccggctgccagcttagggtctggcccc
cacgtgcacactatgatccccattcaaagcgttacgatggctccgccaacgcaatccatg
ccgacgggacaaccggctcccacgggcctgccggccatcggctctgcggccacagccgcg
gtggcagtggcggccgtcgccgctgccgcccctagctcgaccgaagcgtcggcgactgtg
gcagcgtcgtcgatgtggacgccggtcgcggcggcggtgacgccactggtcgcggcggag
acggcggcggcggtccggcagccgccgctgccggtgaacgataaccctaccgtgtccagc
cccgacgacgaggacgacggcatggggctcccggtagatctaatgcacacgttgcgctcg
atggcgtcaggtgagctggtgctgccagaagacggtgacttcggcgacgacgtgtgggcg
cacttgatgacggcggccagcgcgcagcccgccgacggcgtctccggtctagggatggac
ttgagggaaattattccgccgtcggtgcttgaggattga
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