KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_107119
Entry
VOLCADRAFT_107119 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    VOLCADRAFT_107119
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:vcn01009]
    VOLCADRAFT_107119
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcn03019]
    VOLCADRAFT_107119
   03036 Chromosome and associated proteins [BR:vcn03036]
    VOLCADRAFT_107119
Protein phosphatases and associated proteins [BR:vcn01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     VOLCADRAFT_107119
Messenger RNA biogenesis [BR:vcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     VOLCADRAFT_107119
Chromosome and associated proteins [BR:vcn03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     VOLCADRAFT_107119
SSDB
Motif
Pfam: B56
Other DBs
NCBI-GeneID: 9619105
NCBI-ProteinID: XP_002956177
JGI: 107119
UniProt: D8UC16
LinkDB
Position
Unknown
AA seq 501 aa
MLKSMKQKFSGKKDASKNKDDSQPSTSAKAGIPASSKAPAPRPVSATREKPPLPVINEQT
LYQYYAEPLPTFRDVSPAEKQYLFVQKLHLCSFGFDFADPTKHVREKEIKRQTLLELVDY
ANSGAGKFTEGVSEDIIYMLSNNLFRTLPPVRSHGDAEGNYDAEEEEPSLDPAWPHLQIV
YEFLLRYVVSNDTDAKIAKKYIDQQFVLKLLELFDSEDPRERDYLKTILHRIYGKFMVHR
PFIRKAINNVFYRFIFETERHNGVAELLEILGSIINGFALPLKEEHKLFLQRALMPLHKP
KCVAMYHQQLAYCVTQFVEKDSKLAEPVLTALLKYWPVTNSQKEVLFLGELEEILELTQA
AEFQKVMIPLFKQLAKCLNSQHFQVAERSLFLWNNEYIVNLVAQHRHQLLPILFPALEEN
TNSHWNPAVHGLTCNVRKMFQELDEQLYEECKRKYEEEQASERQAMENRDRKWEYLQKLA
LQKSNGRPLPEVKPLSALLRV
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgttgaagagcatgaagcagaagttcagcggaaagaaggacgccagcaagaacaaggac
gactcccagccctcgaccagcgccaaggcgggcattcccgcctctagcaaggcaccggct
cctcgccctgtctcagctactcgggagaagccgccgctcccggtcatcaacgagcagacg
ctctaccagtactatgcggaacccttgcccacctttcgggatgtctccccagcggagaag
cagtatctctttgtgcagaagctgcatttgtgcagctttgggttcgacttcgcggaccct
accaagcacgtccgcgagaaggaaatcaagcggcaaacgcttttagagctggtggactat
gccaactctggggcagggaaatttacggagggcgtctcggaggacattatctatatgctc
agtaacaaccttttcaggacgctcccacccgtgcggtcccatggcgacgcggagggcaac
tatgacgcagaggaggaggagcctagcctggatccggcatggccgcaccttcagatcgtg
tacgagtttctcctccgctacgttgtgtcaaatgacactgatgcgaagattgcgaaaaag
tacattgaccagcagtttgtgcttaagttgctggagctcttcgactcggaggacccccgg
gaacgcgactacctaaaaacgatcctgcaccgcatatatggcaagttcatggtgcaccgg
cctttcatccgcaaggccatcaacaatgtcttctaccgctttatctttgagacggagcgg
cataacggagtcgctgagttgctcgaaattttgggcagcattatcaacggctttgcgctg
ccgctaaaggaggagcataaactgtttctgcagcgggcgctgatgccgttgcacaagccc
aagtgcgtggccatgtaccaccagcagctggcgtattgcgtgacacagtttgtcgagaaa
gactcgaagctggcagagccggtgctcacggcgctcttgaagtactggcctgtgacaaac
agtcagaaggaggtgctgttcctcggggagctggaggagatattggaactgacgcaggca
gctgagttccagaaggtcatgatcccacttttcaaacagttggcaaaatgcttaaacagc
cagcacttccaggtcgcggagcgctccttgtttctatggaacaacgagtacatcgtgaac
ctggtggcgcagcatcgccaccagctattgccaatcctgttcccggcactggaggagaac
acgaacagccactggaaccccgcggtgcacgggctcacgtgcaatgtgcgcaagatgttc
caggagcttgacgagcagttgtacgaagagtgcaaacgcaagtacgaggaggagcaggcg
tcggaacggcaggctatggagaaccgggacaggaaatgggagtacctccaaaagttggcg
cttcagaagagcaatggccggccgctgccggaagtcaagccgctttcggcgctactcagg
gtttga

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