KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_107190
Entry
VOLCADRAFT_107190 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VOLCADRAFT_107190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vcn03041]
    VOLCADRAFT_107190
Spliceosome [BR:vcn03041]
 Complex A
  U2 snRNP components
   U2 related factors
    VOLCADRAFT_107190
 Complex B
    VOLCADRAFT_107190
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 9619441
NCBI-ProteinID: XP_002956354
JGI: 107190
UniProt: D8UCI5
LinkDB
Position
Unknown
AA seq 486 aa
MGSRDRSRSRDRRRSRSRERSRRWDRDRRSRSRSRDRRRSRSRSKSRSRSRDRAKSLAYD
ASISAVQAMAALQQQQQLQRQLLAQQLLLQQQAAAAAAALAPPVQQQNTSTANADRKARE
IYVGNLAIGVVTSDMLRELFNTILANQVPDPANAPPVVNVNLDSAGRFAFVEFRTRELTD
AAIQLDKLELCGRQMNIGRPKGYVAMQMQQQTALAQVPNQLADAAKLGQAQVLAAALAGA
VPASANTLAAAAATLTVNTPTNVVLLENMVSCGTIRDENERKEAGRTNMGLDPSAGQAGP
DATTVPAAGDGRFCLSGILEDVQQEVVKCGPVIGLAVPMPPAHVTNQEASRVYVKYSTAA
EAARCRTMMDGRKFDDNAVKATFVTEGEFLRAQAGEWVAKPGLLMPAGVPALPAVAAGPA
AAPALPAATGLAGLGALGALGAAPAAPQVPGHVPIQQTGGLVLPPGFTLPAGFTLAGAMP
GLGLPK
NT seq 1461 nt   +upstreamnt  +downstreamnt
atggggagcagagaccgttcacggtctcgggacaggcggcgctcaaggtcacgagagcgg
tcgcgaagatgggaccgggaccgtaggtcacgttccaggtcacgagaccggcgacgcagc
cggagcaggagcaaaagtcgcagccggagtcgtgaccgggcgaagtctttagcttacgat
gcaagcattagcgctgttcaggcaatggcagccttgcaacagcagcaacagctccagcgg
caacttctcgcgcaacagctgctattgcagcagcaggctgctgcggcagcggcggccttg
gcgccaccggtgcagcaacagaacacgagcacagcaaatgcagatagaaaggcccgcgaa
atctacgtgggcaaccttgccattggagttgtgacttcggacatgttgcgcgaactgttc
aacacaatcttggccaaccaggtcccagaccccgcgaacgcaccgccggtggtcaacgtg
aacttggactcggcaggtcgctttgccttcgtggagttccgcacgcgagagctcacggat
gccgcaatccagctggataagctggagttatgtggtcggcaaatgaacattggccggccc
aagggttatgtggctatgcaaatgcaacagcaaacagcattagctcaggtccctaaccag
ttggctgacgccgcgaagttgggccaggcgcaggtgctggcggcggctctggcgggtgca
gtgcccgcgtccgctaacacgctagctgcagccgcagcgaccctgacagtcaacaccccc
accaatgtggtgctgttggagaacatggtgtcgtgcgggaccattcgtgatgagaacgag
cgcaaggaggctggtcgcacaaacatgggtttggacccgtcagcggggcaggcgggcccc
gacgcgacaacggtcccagcggccggtgacgggaggttttgcctcagtgggatactcgag
gacgtacaacaggaggtcgtcaagtgcggtcccgtaattggcctggctgtacccatgcca
ccagcccatgtcaccaaccaggaagccagccgcgtatacgttaagtactcgacggccgcg
gaagcggctcgttgccgtacgatgatggacgggcgcaagttcgatgacaacgccgtcaag
gccacatttgtgacggagggcgaattcctgcgcgcccaggcgggagagtgggtggccaaa
ccggggttattaatgccggcaggtgtaccggcattgccagccgtcgctgctggcccagct
gctgcgccagcactgcctgcggcgacgggcttggcaggtctgggagctttgggcgcgctg
ggcgcggcaccagctgctccgcaagtgccaggtcacgtgccaatccagcagacaggcggt
ctggtgttgcccccggggtttacacttccagcggggtttacgttggcaggggctatgcct
gggctcggattgccgaagtaa

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