Volvox carteri f. nagariensis: VOLCADRAFT_107374
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Entry
VOLCADRAFT_107374 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K20474
RAD50-interacting protein 1
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcn04131
]
VOLCADRAFT_107374
Membrane trafficking [BR:
vcn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
VOLCADRAFT_107374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RINT1_TIP1
Motif
Other DBs
NCBI-GeneID:
9622527
NCBI-ProteinID:
XP_002956756
JGI:
107374
UniProt:
D8UDL1
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MLHETQLRGAGAEAESTDNNATASTSAIGAYAWNDPQGAPDPDPTTATSYSSGGGYGYNY
GPGQEPSAGDGYGYSNGNAYAGASAEGITSDGAVTGDGRASANNGRDQGVDSVEGADGGD
TAEVAATTAADASAYSWPADPEGMLTLLQQQRQQYRSWVAQCASTALAALDPSHSRTGSY
AASYPGGGGGASPGVAGPFPDGAIPDDVLGLVEAMDVAGTVRQYMLSLKAAAESVRNAAR
AGANFEALSLPVSEAYDDPSDPAAVEAEGRAEAEFVSAAYGVTSAIATARAHLHQLKQLE
ADPAAALVQEVLSQRQAPAEGGAGLAADAEGGPVAQSAAAVGSSEQLVAPLESKLERVGA
GLCHRLRQEAEGLMPKIQWPPPLADGGGMEGGRGVGSAAPGVAGPGSGAEGTLRSTGAPA
LGSSGSSEDALFRGFEQHPLQARKLVGVGCGGKVGVLTALTHYQMAVEQRTEFYQLLSGG
AQGSENKAGNGGDGDTEAEESDGASGAKPLLWAAKVLAEPVAAKLRAHFQPAAPTGRLDR
PAWLYCTVLEFVRQHGHALASLDDMLACLQLKPHYNMPAEFARAMQDAVLALLRDLRIPA
LLELRNQGNEELSENGNGLAADGDANGAAAAEAEADALLLGLMDASAAYDMAMLPLLGAT
GSRVEADAARGMAMLSAAAAAGGAVLQRRRACDQFDPTAVGTADMHARYVAVAAAGPGPA
AAAAAVAVAAAAATKKATRGAVPPAALPSLLQAWAAAEGAAALRAVEAVVYDESSLVPAE
EAAARALGGGFSSLEDEPLSSAPPTSFSAAASSSLRMGGGLGASSFTGGSSSLIGSVAPW
QRDTWPPVLAREAAALLDGLVARSKWLSANPVQQREFLEAAASPMLALLRKRLSRLLDQA
VSRGEVVSEEGLPKVCATLCAAHFLYDHLQSLLLTDLAPLVQALLAAAAPPPAAAAGEAA
SGAATPPSATAGVPAGKLGAGGGGFWSGLIAVAAGGGGGGGSGGVPASPARLALRDGVTA
LAAGAGGGATTAAAVAAAGGWVAGCSVAYRHAIEANPQFPFTPESDAEEAEDGFGGVDGS
LTASTSLVLLRPSHRPLPRRCFIFSSTFVTLLPWQQLQSCVVRLSLLSRPGFCRPSKKTF
FLQSSLERLSRCCDKATFFDVWRGAALSINRFMFNFIATESRFTRAGARQFAADVAGLAQ
LFAPYSRRGGGGGGAATRPGSFTSVTAAGTTIGGGAAAGNQHFRELQAAARLLCLGDEEA
ADVMRRASAAAVAAAAATSALSPYSHSPQAQSSPQSQVQSPPPPKAQPPSPHSHTRGDPV
RSGMSSDPILSAAGLACLSPLQIMNVIEHSCDDDIGGWRGL
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacgaaacgcaactccgtggcgcgggtgcggaagctgaaagcacggacaacaat
gccaccgccagcacgtctgccatcggggcttacgcttggaatgatccccaaggcgccccg
gatcctgaccccacgaccgccaccagctattcttctggcggcggctatggctacaactac
ggcccaggccaggagccctctgctggcgacggctatggctacagcaatggcaatgcctat
gccggagccagtgctgagggcatcaccagtgacggtgccgtcaccggagatggcagggcg
tcagcgaacaatgggcgggaccagggtgttgacagcgttgaaggggccgatggcggcgac
accgccgaggtggcggccaccactgccgctgacgcgtcagcttattcatggccagccgat
ccggaaggcatgctgacattgctgcagcagcagcgacagcagtatcgctcctgggtagcc
cagtgtgcgtcgacggcgctggctgcgctggacccgtcacacagcagaacagggtcctac
gcagcgtcataccccggcggtggcggtggtgcttcgcccggggtcgccggacccttcccc
gatggggcaatccctgacgacgtgttgggcctggttgaggcgatggacgtggcagggact
gtgcggcagtatatgttatcgctcaaggcggctgcggagtctgttcgcaatgctgcccgc
gcgggggccaattttgaggcgctttcgctgccggtttcggaggcgtacgacgatccatct
gacccggccgctgtggaggctgagggccgcgcagaggcggaatttgtcagtgcggcgtac
ggcgtcacgtcggcaattgcaacggcgcgtgcccacctgcatcagctgaagcagctggag
gcagatccggcagcagcgctggtgcaggaggtgttgagccagcggcaggcgcctgcggag
ggtggtgcgggtctcgcggccgacgcagaggggggcccagtggcgcaatccgcggcggcg
gtggggagcagcgagcagctggtggctccgttggaatcgaaactggagcgcgtcggagcg
ggcctgtgtcaccgcctgcgccaggaggcggaggggcttatgccgaaaatccagtggccc
ccaccactggctgatggaggaggaatggaagggggtagaggagtcggttctgccgcccct
ggagtggctgggccgggctcgggtgcggaggggactctcaggtcaacgggggccccagcg
ttgggctcctccggctcctccgaggatgcgctgttccggggtttcgaacagcaccccctt
caggcgcgcaaactggtgggtgtgggatgtggggggaaggtgggtgtcctcactgcgctg
acccactaccagatggcggtggagcagcgaactgagttctaccagctgctgtcgggaggg
gctcagggctccgagaacaaggcaggaaatggtggtgatggcgatacggaggcggaggag
agcgatggcgcctctggagccaagccgttgctgtgggcagctaaggttcttgcggagcct
gttgcggcgaagctccgtgcccacttccaacccgccgctcccacgggacgcttggacagg
ccggcatggttgtactgcactgttttggagtttgtacggcagcacggccacgcgctggcc
tcccttgacgacatgttggcgtgtctgcagctcaaaccacactacaacatgcctgcggag
tttgcgagggccatgcaggatgccgtactggccttgctccgagacctccgtattcctgcc
cttcttgaactccgaaaccaaggcaatgaggaattatcggaaaatggcaacggcttggcg
gcagacggggatgccaacggtgctgctgctgctgaggcggaggctgacgcgctgttgctg
ggccttatggacgcctctgcggcgtacgacatggcgatgctaccgctcctgggtgcgacg
ggctcgcgggtggaggcggatgcggcgcggggaatggcgatgctgtcggctgctgctgca
gccggaggagcagtgctgcagcggagacgcgcttgcgatcaatttgatcccactgccgtc
ggtaccgccgacatgcacgcgaggtacgtggccgtggccgccgcgggaccggggccggcg
gcagcggcagcggcggtggcggtggcggcggcggcggctactaagaaggcgacacgtggg
gcggtcccgccagcggccctgccatccctgctgcaggcgtgggctgcggcggagggtgca
gcggcgctgcgggccgttgaggcggtcgtgtacgacgagtcgtcattggtgccggcagag
gaggcagcagcacgagctctgggcggcggcttctcttccctggaggatgagccgctgtcc
tccgcaccccccaccagcttcagcgccgccgcctcgtcgagtctgcgaatgggaggtggc
cttggtgccagcagctttaccggcggcagcagtagcttgatagggagtgtagccccttgg
caacgagacacctggccgccggtactggctcgggaagctgcggcgctgctggatgggctg
gtggccagatccaagtggctctccgcgaaccctgtacagcaacgggagttcttagaggcg
gccgcgagccctatgctggcgctgctgcggaagcggctgagtcggctgctggatcaggct
gtttcacgtggggaagtggtttcggaggaggggctgccgaaggtgtgcgctaccctctgt
gccgcacacttcctgtacgaccacctacaatcgcttctattaaccgacctggcgccgctc
gtacaagctctcctcgcggcggcagcgccgccgccagctgccgccgctggggaagccgcc
agcggcgccgctacaccgccgagtgctactgccggcgtgcccgccggcaagcttggcgct
ggtggcggcggcttctggagtggcctaatcgccgttgcggcaggcgggggtggcggcggc
ggcagcggcggcgtgccggcgtcaccggcacggcttgcgctccgtgacggcgtgacagcg
ctggcggcgggcgctggcggaggcgccaccaccgccgctgcggtggcagcggcaggtggg
tgggtggctgggtgttcagtagcgtatcgtcacgcaattgaggccaacccgcagttcccc
ttcacgccggaaagcgacgcggaggaggcggaggacggtttcggcggcgttgacggcagc
ctgacagcttcgaccagtctcgtcctgcttcgtccatcacaccgtcctttgccccggcgc
tgctttatcttcagttctacgtttgttactctcttgccctggcagcagcttcaatcgtgt
gtggttcgtctttccctcctttcccgccccggtttttgccggccctcaaaaaaaacattt
ttcctacagagctccctggagcgtctctcccgctgctgtgacaaggccaccttttttgac
gtgtggcggggggcagcgctgtccatcaaccgcttcatgttcaatttcatcgcgacggag
agccgcttcacgcgagcaggcgcccgccagtttgccgctgacgtggcggggctggcacag
cttttcgcgccgtacagtcgccgcggcggtggcggtggcggcgcagcaacccgcccagga
tccttcaccagtgttacagccgccggtaccactattggcggcggggccgccgccggtaac
cagcattttcgtgagcttcaagctgctgctcggttgttgtgtttgggtgatgaggaggcc
gcagatgtgatgcgccgggcgagcgcggcggcggtggcagcagcggccgccacctccgcc
cttagcccatactcccactcgccccaagcccagtcatcaccccagtcccaagtccagtca
cctccaccacccaaggcccagcctccgtcacctcacagccacacccgcggcgacccggtc
cgcagcggcatgtcgtccgaccccatattgagcgccgctggtttggcgtgtctgtctccc
ctgcagattatgaacgtcatcgaacacagctgtgatgacgacattggtgggtggaggggg
ctgtag
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