KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_107374
Entry
VOLCADRAFT_107374 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K20474  RAD50-interacting protein 1
Organism
vcn  Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vcn04131]
    VOLCADRAFT_107374
Membrane trafficking [BR:vcn04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   NRZ (DSL1) complex
    VOLCADRAFT_107374
SSDB
Motif
Pfam: RINT1_TIP1
Other DBs
NCBI-GeneID: 9622527
NCBI-ProteinID: XP_002956756
JGI: 107374
UniProt: D8UDL1
LinkDB
Position
Unknown
AA seq 1361 aa
MLHETQLRGAGAEAESTDNNATASTSAIGAYAWNDPQGAPDPDPTTATSYSSGGGYGYNY
GPGQEPSAGDGYGYSNGNAYAGASAEGITSDGAVTGDGRASANNGRDQGVDSVEGADGGD
TAEVAATTAADASAYSWPADPEGMLTLLQQQRQQYRSWVAQCASTALAALDPSHSRTGSY
AASYPGGGGGASPGVAGPFPDGAIPDDVLGLVEAMDVAGTVRQYMLSLKAAAESVRNAAR
AGANFEALSLPVSEAYDDPSDPAAVEAEGRAEAEFVSAAYGVTSAIATARAHLHQLKQLE
ADPAAALVQEVLSQRQAPAEGGAGLAADAEGGPVAQSAAAVGSSEQLVAPLESKLERVGA
GLCHRLRQEAEGLMPKIQWPPPLADGGGMEGGRGVGSAAPGVAGPGSGAEGTLRSTGAPA
LGSSGSSEDALFRGFEQHPLQARKLVGVGCGGKVGVLTALTHYQMAVEQRTEFYQLLSGG
AQGSENKAGNGGDGDTEAEESDGASGAKPLLWAAKVLAEPVAAKLRAHFQPAAPTGRLDR
PAWLYCTVLEFVRQHGHALASLDDMLACLQLKPHYNMPAEFARAMQDAVLALLRDLRIPA
LLELRNQGNEELSENGNGLAADGDANGAAAAEAEADALLLGLMDASAAYDMAMLPLLGAT
GSRVEADAARGMAMLSAAAAAGGAVLQRRRACDQFDPTAVGTADMHARYVAVAAAGPGPA
AAAAAVAVAAAAATKKATRGAVPPAALPSLLQAWAAAEGAAALRAVEAVVYDESSLVPAE
EAAARALGGGFSSLEDEPLSSAPPTSFSAAASSSLRMGGGLGASSFTGGSSSLIGSVAPW
QRDTWPPVLAREAAALLDGLVARSKWLSANPVQQREFLEAAASPMLALLRKRLSRLLDQA
VSRGEVVSEEGLPKVCATLCAAHFLYDHLQSLLLTDLAPLVQALLAAAAPPPAAAAGEAA
SGAATPPSATAGVPAGKLGAGGGGFWSGLIAVAAGGGGGGGSGGVPASPARLALRDGVTA
LAAGAGGGATTAAAVAAAGGWVAGCSVAYRHAIEANPQFPFTPESDAEEAEDGFGGVDGS
LTASTSLVLLRPSHRPLPRRCFIFSSTFVTLLPWQQLQSCVVRLSLLSRPGFCRPSKKTF
FLQSSLERLSRCCDKATFFDVWRGAALSINRFMFNFIATESRFTRAGARQFAADVAGLAQ
LFAPYSRRGGGGGGAATRPGSFTSVTAAGTTIGGGAAAGNQHFRELQAAARLLCLGDEEA
ADVMRRASAAAVAAAAATSALSPYSHSPQAQSSPQSQVQSPPPPKAQPPSPHSHTRGDPV
RSGMSSDPILSAAGLACLSPLQIMNVIEHSCDDDIGGWRGL
NT seq 4086 nt   +upstreamnt  +downstreamnt
atgctgcacgaaacgcaactccgtggcgcgggtgcggaagctgaaagcacggacaacaat
gccaccgccagcacgtctgccatcggggcttacgcttggaatgatccccaaggcgccccg
gatcctgaccccacgaccgccaccagctattcttctggcggcggctatggctacaactac
ggcccaggccaggagccctctgctggcgacggctatggctacagcaatggcaatgcctat
gccggagccagtgctgagggcatcaccagtgacggtgccgtcaccggagatggcagggcg
tcagcgaacaatgggcgggaccagggtgttgacagcgttgaaggggccgatggcggcgac
accgccgaggtggcggccaccactgccgctgacgcgtcagcttattcatggccagccgat
ccggaaggcatgctgacattgctgcagcagcagcgacagcagtatcgctcctgggtagcc
cagtgtgcgtcgacggcgctggctgcgctggacccgtcacacagcagaacagggtcctac
gcagcgtcataccccggcggtggcggtggtgcttcgcccggggtcgccggacccttcccc
gatggggcaatccctgacgacgtgttgggcctggttgaggcgatggacgtggcagggact
gtgcggcagtatatgttatcgctcaaggcggctgcggagtctgttcgcaatgctgcccgc
gcgggggccaattttgaggcgctttcgctgccggtttcggaggcgtacgacgatccatct
gacccggccgctgtggaggctgagggccgcgcagaggcggaatttgtcagtgcggcgtac
ggcgtcacgtcggcaattgcaacggcgcgtgcccacctgcatcagctgaagcagctggag
gcagatccggcagcagcgctggtgcaggaggtgttgagccagcggcaggcgcctgcggag
ggtggtgcgggtctcgcggccgacgcagaggggggcccagtggcgcaatccgcggcggcg
gtggggagcagcgagcagctggtggctccgttggaatcgaaactggagcgcgtcggagcg
ggcctgtgtcaccgcctgcgccaggaggcggaggggcttatgccgaaaatccagtggccc
ccaccactggctgatggaggaggaatggaagggggtagaggagtcggttctgccgcccct
ggagtggctgggccgggctcgggtgcggaggggactctcaggtcaacgggggccccagcg
ttgggctcctccggctcctccgaggatgcgctgttccggggtttcgaacagcaccccctt
caggcgcgcaaactggtgggtgtgggatgtggggggaaggtgggtgtcctcactgcgctg
acccactaccagatggcggtggagcagcgaactgagttctaccagctgctgtcgggaggg
gctcagggctccgagaacaaggcaggaaatggtggtgatggcgatacggaggcggaggag
agcgatggcgcctctggagccaagccgttgctgtgggcagctaaggttcttgcggagcct
gttgcggcgaagctccgtgcccacttccaacccgccgctcccacgggacgcttggacagg
ccggcatggttgtactgcactgttttggagtttgtacggcagcacggccacgcgctggcc
tcccttgacgacatgttggcgtgtctgcagctcaaaccacactacaacatgcctgcggag
tttgcgagggccatgcaggatgccgtactggccttgctccgagacctccgtattcctgcc
cttcttgaactccgaaaccaaggcaatgaggaattatcggaaaatggcaacggcttggcg
gcagacggggatgccaacggtgctgctgctgctgaggcggaggctgacgcgctgttgctg
ggccttatggacgcctctgcggcgtacgacatggcgatgctaccgctcctgggtgcgacg
ggctcgcgggtggaggcggatgcggcgcggggaatggcgatgctgtcggctgctgctgca
gccggaggagcagtgctgcagcggagacgcgcttgcgatcaatttgatcccactgccgtc
ggtaccgccgacatgcacgcgaggtacgtggccgtggccgccgcgggaccggggccggcg
gcagcggcagcggcggtggcggtggcggcggcggcggctactaagaaggcgacacgtggg
gcggtcccgccagcggccctgccatccctgctgcaggcgtgggctgcggcggagggtgca
gcggcgctgcgggccgttgaggcggtcgtgtacgacgagtcgtcattggtgccggcagag
gaggcagcagcacgagctctgggcggcggcttctcttccctggaggatgagccgctgtcc
tccgcaccccccaccagcttcagcgccgccgcctcgtcgagtctgcgaatgggaggtggc
cttggtgccagcagctttaccggcggcagcagtagcttgatagggagtgtagccccttgg
caacgagacacctggccgccggtactggctcgggaagctgcggcgctgctggatgggctg
gtggccagatccaagtggctctccgcgaaccctgtacagcaacgggagttcttagaggcg
gccgcgagccctatgctggcgctgctgcggaagcggctgagtcggctgctggatcaggct
gtttcacgtggggaagtggtttcggaggaggggctgccgaaggtgtgcgctaccctctgt
gccgcacacttcctgtacgaccacctacaatcgcttctattaaccgacctggcgccgctc
gtacaagctctcctcgcggcggcagcgccgccgccagctgccgccgctggggaagccgcc
agcggcgccgctacaccgccgagtgctactgccggcgtgcccgccggcaagcttggcgct
ggtggcggcggcttctggagtggcctaatcgccgttgcggcaggcgggggtggcggcggc
ggcagcggcggcgtgccggcgtcaccggcacggcttgcgctccgtgacggcgtgacagcg
ctggcggcgggcgctggcggaggcgccaccaccgccgctgcggtggcagcggcaggtggg
tgggtggctgggtgttcagtagcgtatcgtcacgcaattgaggccaacccgcagttcccc
ttcacgccggaaagcgacgcggaggaggcggaggacggtttcggcggcgttgacggcagc
ctgacagcttcgaccagtctcgtcctgcttcgtccatcacaccgtcctttgccccggcgc
tgctttatcttcagttctacgtttgttactctcttgccctggcagcagcttcaatcgtgt
gtggttcgtctttccctcctttcccgccccggtttttgccggccctcaaaaaaaacattt
ttcctacagagctccctggagcgtctctcccgctgctgtgacaaggccaccttttttgac
gtgtggcggggggcagcgctgtccatcaaccgcttcatgttcaatttcatcgcgacggag
agccgcttcacgcgagcaggcgcccgccagtttgccgctgacgtggcggggctggcacag
cttttcgcgccgtacagtcgccgcggcggtggcggtggcggcgcagcaacccgcccagga
tccttcaccagtgttacagccgccggtaccactattggcggcggggccgccgccggtaac
cagcattttcgtgagcttcaagctgctgctcggttgttgtgtttgggtgatgaggaggcc
gcagatgtgatgcgccgggcgagcgcggcggcggtggcagcagcggccgccacctccgcc
cttagcccatactcccactcgccccaagcccagtcatcaccccagtcccaagtccagtca
cctccaccacccaaggcccagcctccgtcacctcacagccacacccgcggcgacccggtc
cgcagcggcatgtcgtccgaccccatattgagcgccgctggtttggcgtgtctgtctccc
ctgcagattatgaacgtcatcgaacacagctgtgatgacgacattggtgggtggaggggg
ctgtag

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