Volvox carteri f. nagariensis: VOLCADRAFT_107382
Help
Entry
VOLCADRAFT_107382 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
VOLCADRAFT_107382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcn04131
]
VOLCADRAFT_107382
Membrane trafficking [BR:
vcn04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
VOLCADRAFT_107382
Hops complex
VOLCADRAFT_107382
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_PEP5_VPS11
PEP5_VPS11_N
VPS11_N
Motif
Other DBs
NCBI-GeneID:
9622636
NCBI-ProteinID:
XP_002956823
JGI:
107382
UniProt:
D8UDN2
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MASPGNTMRTQSAKADHERYQLRQPTAAAAEPARVTGPTAALQPQRGTRQDGQVKDETSY
IRVLVALSEGIFCMWLQLCRASEKMSFAFKRFNFFQPHQVPRHGFPPNASCVVPGGPLLW
VGTESGSVCVLDSRLSLIGSFNAHGHKVLEVLWLEILHLSYRLAWGHGGSHPSFHLHLSD
DRTGSVVRQRGGVGGGPPRAKLHHSRRLSARPDEGDMLSVTGLELTGTSDLLSLFVVTES
LTLCFHLQANTKVQVRGVVGPGGGVGGGWTVLDRQGSPGPRCCCLRPGGSLLTVARSEGL
YDYTADTRAGCTVFEGTKQRLTAFGRYLVVVTREEGNPATGSPTSSASNIQLSGIGGGGG
GGVGPPVGGGFGLGGGVGFSSSGSGGGGSSCLQLADVRTKLLAGTFVLQGLQHVFCAWGA
VHAVTAAGAVWCYREIDLPSQLETLLRRSLHKLALDVARSWTPGVADVTTLANIHQRWGD
HLYGKGEYDAAMTQYLETVGHLEPSYVIRRFLDAQRIHNLTAYLELMHERGLATCDHTTL
LLNCYTKLKVLGVRDMRMYAAAAAEAAAAATVASSSSRKAGGGGGGARKQQKQADAQAGT
SSLASAAATGLLFDPDTAIRVLRGAGYAEHALWVADAAGQIDSVLDILLDELGDADEAIA
FLEELSRKRRAEALKKYGKALIRMRAEAATGLIMDLCCALGLGPGAGASFPPNIKINITI
NIDIIIIININIVNLPSIPYLYHARPPPAPTGDMYRASVADFAHLYNGEPTALMLLCEFI
LNTNSGAAAAAAAAASHGHAHAVGGCGGNEEYDNVTARARAYERLLYHTLLELYLADQLW
QQPNQQPQPLPVPTNKPAKTPTGSTSTAASSPVKGELSAACDNRTTEAF
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcccagggaataccatgcgcacccagtcggcgaaggccgaccatgagcgctat
cagctgcgccagccaactgctgccgccgcggagccggccagggtaactgggcccaccgcc
gcgctccagccgcaacgcggcacacggcaggatggacaggtcaaagacgagacgtcatat
atacgggttcttgtggctttgtccgagggaatcttctgcatgtggcttcagctatgtaga
gcctcggagaagatgagctttgcattcaagcgctttaattttttccagccccaccaggtt
cctcggcatggctttcctcccaacgcaagctgcgttgtgccgggaggtccattgttatgg
gtgggcaccgagtccggaagcgtctgtgtcctagactcccggctttccctgataggatcg
tttaatgcccatggtcacaaggtgctggaggtgttgtggctggagatcctccatctgtcg
taccggctcgcttggggtcacggggggtcgcatcctagctttcacctccacctcagtgac
gatcgcactgggtctgtcgtccggcagcgtggtggtgttggcgggggacctccccgagcc
aagctccaccactcacggcgcctgtcggcccgaccggacgagggggacatgctcagcgtg
accgggttggaactgaccggcacttcggatttgttgtcgctgttcgtggtgacggagagt
ttgacgctgtgcttccatcttcaggcgaataccaaggtacaggttcggggggtggtgggg
cctgggggtggggtggggggtggatggacggttctcgaccgccaaggctcccccggcccc
cgctgctgctgccttaggccggggggctcgctgctgacggtggcacgatccgagggcttg
tacgactatacggcagacactcgagctggttgtacggtgtttgaagggactaagcagcgg
ttgactgcgtttgggagatatcttgtcgtggtcacccgcgaagagggcaaccccgccacg
ggcagccccacttcgtccgccagcaacatccagctatcgggcatcggcggcggcggcggc
ggcggcgtagggcccccggtcggcggcggtttcggtctcggcggcggcgtggggtttagc
agtagcgggagtggaggtggcggcagcagctgccttcagttagcggatgtacggacgaag
ctgctggcgggcacatttgtactgcagggcctgcagcacgtgttttgcgcgtggggtgcc
gtacacgctgtgacagcggccggcgccgtgtggtgttatcgggagattgatttaccttca
cagctggagaccctcctccgtcgctccttacacaaactggcgctagatgttgcgcgcagc
tggactccaggggtggctgacgtcaccactctggccaacatacatcaaagatggggagat
catctgtacggcaagggcgagtacgacgcggccatgacgcagtacctggaaacggttggg
catttggagccgtcgtacgtcatccggcgtttcttagatgcgcaacggattcacaacttg
accgcttacctggagctcatgcacgagcggggtttggccacatgcgaccacaccacgctg
ctgctcaactgctacacaaaactcaaggtattgggtgtgcgcgatatgcgtatgtatgct
gctgcggcggcggaggccgccgccgccgccacagtagcgtcatcgtcgtcgcgaaaggct
ggcggaggcggaggcggtgcacgcaagcagcagaagcaggctgatgcgcaagcgggtacg
tcctccttggcatccgcagcagcgacaggtctcctgttcgatcccgacacggcgattcga
gtcttgcgaggggcgggatacgcggaacacgcactgtgggttgcggacgcggcggggcag
atcgattccgtattggatattttattggacgagctgggcgatgcggacgaggcgatcgcc
ttcctggaggagctgtcccggaaaaggcgagctgaggcgctcaagaagtacggcaaggct
ctcatcaggatgcgggctgaagctgccacgggccttatcatggatctctgctgcgcactc
ggcctggggcccggagccggggcttctttcccgcccaacatcaaaatcaacatcaccatc
aacatcgacatcatcatcatcatcaacatcaacattgtcaacctaccttccattccctac
ctctaccatgctcggcccccgccagcacccacaggcgacatgtaccgggcctcagtagcg
gacttcgcgcacttgtacaacggcgagccgactgccctcatgctgctgtgtgaattcatt
ctcaacacgaactcgggagcggcagcggcggcggcggcggcagcttcgcacgggcatgcg
catgctgtcggcgggtgcggcggcaatgaagagtacgacaacgtgacggcgcgcgcgcga
gcatacgaacggctgttgtaccacaccctcttggagctgtacttggcggatcagctgtgg
caacaaccgaatcaacaaccgcaaccgttacctgtcccaactaacaaacccgccaagacg
ccgacagggtcgacgtcgacggctgcgtcatctccggtcaaaggggagctgtcggcggcc
tgcgacaatcgcaccacggaagcattttga
DBGET
integrated database retrieval system