Volvox carteri f. nagariensis: VOLCADRAFT_107445
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Entry
VOLCADRAFT_107445 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K14411
RNA-binding protein Musashi
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
VOLCADRAFT_107445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_107445
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
VOLCADRAFT_107445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
9622659
NCBI-ProteinID:
XP_002956921
JGI:
107445
UniProt:
D8UE17
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MTDKQSAKVFIGGLSWETTGEKLRAYFENFGSVREAFVSYNRNNGRPRGFGFVVFESPEV
ADKVVATKHTIDRREVEAKKAVPKEETPEEKQQGSAPQRTKKIFVGGLAPSVDEAQLRQH
FSQFGTVEDAVVMYDHENKRPRGFGFVTFAEEDAVDRVFSHGAVQTIADKPIEVKAAVPR
DQMPPTLRMHGSYYGQPPHHRGGPGPGYGAGPHRNNSFAGPPAYGPPGPNYPPPYNNYGR
PFSGRAPNSFGGYGPRSPGPGPGPRQPPMPAGSLGAGPYGGYNQQRFPQSAQGPGTQSGT
PGSATASSAKVPPMPNAYDVYSGQLNGVNNAMLSSLYNNLFMPNGLPTAAAAAAVNPKQL
SSLNNQLKALNLAAGFANFGSAPDASYQDDAAAAAYAAANPEDFAASAAAEAMQAGLNSL
AVNPDLNPLHDAGFTTAPAPGWSS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaaacagagcgcaaaggtctttataggagggctgagctgggagacgaccggc
gaaaagcttagggcctactttgagaactttgggtcagtgcgcgaggcctttgtttcttac
aaccgcaacaatggtcgtccacgtggcttcggctttgttgtcttcgagagcccagaggtt
gcggacaaggtggtcgctaccaagcacacgattgaccgaagagaggtcgaggccaaaaaa
gccgtgcccaaggaggagacgcccgaggagaagcagcaaggctcggcgccgcagcgcacc
aagaagattttcgtgggcggccttgcgcccagcgtggacgaggcgcagttgcggcagcac
ttcagccaatttggtaccgtagaggatgcagtggtcatgtatgaccacgagaacaagcgg
ccacgtgggttcggcttcgttacttttgccgaggaggacgcagtcgaccgcgtcttcagc
catggcgcagtccagacaattgccgacaagcccatagaggtgaaggccgcggttccccgc
gaccaaatgcctcctacgctgcgtatgcatggaagctactacggccagccgccgcatcat
cgcggcggacctgggccgggctacggtgcaggcccgcatcggaacaacagttttgcaggt
ccacccgcatacggtccgcctggtcccaactatccacctccttacaacaattatgggcga
ccttttagcggacgtgcgccgaacagcttcggtggatacggacctcgcagtcccggaccc
gggccaggtcctcgccaaccgcctatgcccgcagggtcgttaggcgcaggaccatacggc
ggctataaccagcagcgatttccacaatctgcacaaggcccgggcacgcagtccggtact
cccggtagcgcgaccgcatcatcagcaaaagtgccgcccatgccaaacgcttacgacgtc
tatagcgggcagcttaatggcgtcaacaacgcgatgctgtcctcgctgtataacaatctc
ttcatgccaaacggattgccgacagcagcggcagcagcggcagtcaacccaaagcagctt
agctccttgaacaaccagctcaaggcgctcaacctggcagcaggcttcgccaattttggt
agcgctccggatgcgagctatcaagatgacgctgcagccgcagcatatgcggcagccaac
cccgaggacttcgccgcgtctgctgccgccgaagctatgcaggctggtctgaacagcctc
gcagtcaaccctgacttaaacccgttgcatgacgccggcttcacaacagcgccggcgccg
ggctggtccagttaa
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