Volvox carteri f. nagariensis: VOLCADRAFT_107605
Help
Entry
VOLCADRAFT_107605 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn00906
Carotenoid biosynthesis
vcn01100
Metabolic pathways
vcn01110
Biosynthesis of secondary metabolites
Module
vcn_M01040
Lutein biosynthesis, plants, lycopene => lutein
vcn_M01045
Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
VOLCADRAFT_107605
Enzymes [BR:
vcn01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
VOLCADRAFT_107605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
Trp_halogenase
FAD_oxidored
Thi4
HI0933_like
FAD_binding_2
NAD_binding_8
GIDA
Pyr_redox_3
FAD_binding_3
Motif
Other DBs
NCBI-GeneID:
9626716
NCBI-ProteinID:
XP_002957303
JGI:
107605
UniProt:
D8UF32
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MLLQAGSCPSALRSGLRPQRLARVTPLVPSLRRCTRAVIAAAQKAAFSSGPYPIPEGPAS
HYYRETESWPTEETLPLQQHNLEQQPYVDLIVAGAGPAGVAAAGRVAAAGFSVCVIDPEP
LAHWPNNYGVWLDEFQAMGLEDSLHVIWPKAKVWLNSLPDGEKFLNRPFARVDRPKLKRM
LLERCNAAGVTFLYGKVSGCCHGEGSSEVQLADGRKIRGSLVLDATGHSRRLVEYDKKFD
PGFQGAYGIVAEVESHPFDIDTMLFMDWRDEHTHGPGLEAMRAANEKLPTFLYAMPFTKN
KVFLEETSLVSRPAVGFPELKERLEARLKWLGIKVTRVEEEEYCLIPMGGVLPKHPQRVL
ALGGTAGMVHPSTGFMIYRMMSAAPTVADAIIDQLSCALRPADESEAVSMANAVWRATWP
VERVRQRAFFTFGMDVLLSLDLYEMREFFRAFFSLSSFHWHGFLSTRLSFPQLIVFGLSL
FLKSSNAARSSLLLRGIPGLLAMLVELVPTLGGASYYPGMTSLKERKDAVDAAARQAAAA
TGAAVRQPLLATAGAVMTGPATAAGMPVGAAAAVPAAVVLEKEKEEEASVTVGN
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcttctccaagcgggcagctgtcccagcgcccttcgcagcggtttgcggccacaacga
cttgctcgcgttactccgctcgtcccatctttgcgtcgctgcacgcgcgctgtcatagct
gctgcacaaaaggcggctttttcatccgggccatacccaatcccagaaggccccgccagc
cactactaccgcgagacggagagctggccgaccgaggaaacactgccgctgcagcaacac
aacctggagcagcagccttacgtggacttaatcgtagctggtgctggacccgcgggcgtt
gcagcggcagggcgagtcgcagcggccggattctccgtctgtgtcatcgaccctgagccg
ctggcccattggcccaataattatggcgtctggcttgatgaatttcaggcgatgggcctc
gaggactccctccacgtcatttggccgaaggccaaggtctggctcaacagcctgcccgat
ggagaaaagttcctgaaccgtccttttgcccgggtagaccgacccaaattgaagcgaatg
ctgctggagcgctgtaatgctgcgggcgttacgttcctgtacggcaaggtgtccgggtgt
tgccacggtgaggggagctccgaggtgcagctggcggatggcaggaagattcgcgggtcg
ttggtgctggacgccacgggacactcgcggcggttagtggagtacgacaagaagtttgac
cccgggtttcagggggcgtatgggattgtggcggaggtggagtctcaccccttcgacatc
gacaccatgttgttcatggactggcgcgacgaacacacacacggcccaggcttggaggcc
atgagggcggccaatgagaagctgcccacgtttttgtacgccatgcccttcaccaaaaac
aaggtctttctggaggaaaccagtttggtttcccggccggctgtgggttttccggagctt
aaggagcgcctggaggcgcgattgaagtggctgggcatcaaggtcacccgggtggaggag
gaggagtactgcctcatccccatggggggtgtgctgcccaagcacccgcagagggtactg
gcgctggggggcacagcaggtatggtgcacccatccaccggcttcatgatctaccggatg
atgagcgcggcgcccacggtggcggatgccatcatcgaccagctcagttgcgctctacgt
cccgcggacgagtccgaggctgtgagcatggcgaacgccgtctggagagccacgtggccc
gtggagcgtgtacggcagagggcgttcttcacgtttggaatggacgtactgctttccctg
gacctgtacgagatgagggagttcttcagggccttcttcagtctgagcagtttccactgg
catggcttcctgtccacacggctgtcgttcccgcagttgattgtgttcggattgtcgctg
ttcctcaagtcctccaacgccgcgcgctcctcccttctgctgcgcggtatacccggcctg
ctggccatgttggtggagctggtgcccacactggggggtgccagctattacccggggatg
acgtcgctaaaggagcgaaaggatgctgtggacgctgcggcccgccaggcagcggccgcc
acgggggccgctgtacgacaaccgctactcgccacggccggtgctgtcatgaccggcccc
gcgaccgctgcggggatgcccgtgggcgccgccgccgctgtgcctgctgcggtggtgctg
gagaaggagaaggaggaggaggcctccgtgactgttggcaactga
DBGET
integrated database retrieval system