Volvox carteri f. nagariensis: VOLCADRAFT_107666
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Entry
VOLCADRAFT_107666 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K13217
pre-mRNA-processing factor 39
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_107666
Spliceosome [BR:
vcn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
VOLCADRAFT_107666
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
PRP6_TPR
TPR_14
ARM_TT21_5th
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
9626906
NCBI-ProteinID:
XP_002957409
JGI:
107666
UniProt:
D8UFI7
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MAAHVYERGVAATPYSSELWAHYATFKKGLPDATADDVRSVFERGLAYVGTDYNSQTLWD
KYFAFEQERGSTMHIASLYSRVLACPVRDLDRYYTSFKNYIHPLAAAQIVQPNDYDSIRL
RLESERAAEQAKAAEAAKAVAEAKAAEAAKAAADAKIKADAEAAAAAEAKAEAAGEAVME
EIKTEDAPVDIKAEGKSGSEEGKATETTADVAMESAASGVIKVKEEDEVPAANGDVDQPM
EEAKQEAAAAAVPDAAAEADTTAPASAASEGQEQGADGVITEAEDKDAGEAAAVPETAPA
APPAVAASEPAEPPKPEPIVVTDEEIKQVWVRKQDGLYEQTKQELLRRKPFEDAARRPYF
HIKPLDGVQLFNWIRYLDYVEGRSDYTATVTLYERCLVACANYPEFWQRYVRYLERTDPQ
AAKPALERAVMGFCKRRPEIHLFAAHFDERHGDVEGARARYKQLLNSVAPRLLEAVTAAA
NFERRQGNLEAACHYLSELMNEEKAKESSRIYPFLAIHYAHFLRRNTGDLAAARKVLDDA
LQQCPGVRSLWEAAIHFEELVGGAEAVSRALDLYNRCTGSPPEGAVAATAAGRCLPERDR
EELSARSVDFADMYGTIDQVKVVSARHAQRFMLPTTVTAEARAAASAKRVAEASAGAPAA
KTARPEGATTASGSAAVAVPPPPPMMAPAAAAGYYPPGPPAAAAAAAAAAYSSYYGYGQY
QAAPQYQGYGAYPGYGY
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacacgtgtacgaacgtggtgttgcagcgaccccctacagctctgaattgtgg
gcacactacgccacctttaaaaaaggtcttcctgatgcgacagcggatgatgtccgaagc
gtcttcgagcgcggtttagcatatgtgggcactgactacaacagccagacgctgtgggat
aagtactttgcgttcgagcaggagcgcggcagcacgatgcacattgcatcgctgtacagc
cgcgtattggcttgtccagtgcgggatctggaccggtactacaccagcttcaagaactac
attcatccattggcagcggcccagatcgtgcagcccaatgattacgactccatccggttg
cgcctggagtcggagcgcgcggccgagcaggctaaggcagcagaggccgccaaagcagtg
gcggaggctaaggcagccgaagcagccaaagcagcggcggacgccaagatcaaagccgac
gcggaggctgctgctgcggcagaggcaaaggcagaggcggctggagaagcagtaatggag
gaaataaagacagaggacgcgcccgtcgacattaaggctgagggaaagtctggaagcgag
gagggcaaggctacggagaccaccgccgatgttgccatggagtctgctgcctctggggtt
atcaaggtcaaggaggaggatgaagtgcctgcggcgaacggcgacgtggaccagccaatg
gaggaagcgaagcaggaggcggcggcggcagctgtccctgacgcagctgcggaagcagat
actacagctcctgcgtcagcagcatccgaagggcaggagcagggggcggatggcgttatc
accgaagctgaggacaaagatgccggcgaggcagcggcagtgccggagaccgcccctgcg
gcccctcctgccgtggcagcctcagaacccgctgagccgccgaagcctgagccgatcgta
gtcacagacgaggagatcaagcaggtttgggtacggaagcaagacgggttgtatgagcag
acgaagcaggagctgctgcgccgcaagcccttcgaggatgctgcgcggcggccgtacttc
cacatcaagccgcttgatggcgtgcagcttttcaactggattcgctacctagactacgtc
gagggccgcagtgactatacggctaccgttaccctgtacgagcgctgtcttgtggcttgt
gcaaactatccagagttctggcaacgctacgtgcgctacctggagcggactgatccacag
gcagccaagccggcgcttgagcgtgcagtgatgggcttttgcaaacggcggccggagatt
catctctttgcagcgcatttcgacgagcggcatggcgacgtggagggtgctcgcgcacgc
tacaagcaactgttgaacagcgtggcgcctcgcctccttgaggcggttacagcagccgcc
aattttgagcgacggcagggcaacctagaggctgcgtgccactacctgtcggaactgatg
aacgaggagaaggcaaaggaaagctcgcgcatctaccccttcctagcaatccattacgcg
catttcctacgccgcaacacgggagacctggcggcggcgcgcaaggttctggacgacgcg
ttgcagcaatgcccaggcgtccgcagcttgtgggaggcagctatacactttgaagagtta
gttggcggggcagaggctgtgtcacgagcgctggacttgtacaacaggtgtacaggctcg
ccaccggagggcgcggtggctgcaacggcagcagggcggtgcttgcccgagcgcgaccgg
gaagagctatcagcacggtcagtagacttcgcggacatgtacggcacgattgaccaggtc
aaggtggtctcggcgcgccacgcgcagcgctttatgttgccaacgacggtgacggcggaa
gcgcgtgccgccgccagtgccaagcgagtagcggaggcgtcagctggggccccggcggca
aagacggctcgtcctgaaggcgccaccacagcctctgggtccgctgcggtggcagtgcct
ccgcccccgcccatgatggcacctgccgccgcggcagggtattacccacctggccctcct
gctgctgcagcagcagcagcagcggcggcatattcatcatactacgggtacgggcagtac
caggctgcgccacagtatcagggatacggggcatatcctgggtacggttactga
DBGET
integrated database retrieval system
