Volvox carteri f. nagariensis: VOLCADRAFT_107877
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Entry
VOLCADRAFT_107877 CDS
T01330
Symbol
crb1
Name
(RefSeq) subunit of circadian RNA-binding protein
KO
K13210
far upstream element-binding protein
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_107877 (crb1)
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_107877 (crb1)
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
VOLCADRAFT_107877 (crb1)
Spliceosome [BR:
vcn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
VOLCADRAFT_107877 (crb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_PNO1_2nd
KH_KhpA-B
KH_PARP14_8
KH_2
WW
KH-I_KHDC4-BBP
KH_Vigilin
MOEP19
KH_N4BP1_2nd
WW_2
KH_PARP14_5
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
9623058
NCBI-ProteinID:
XP_002957962
JGI:
107877
UniProt:
D8UH03
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MAEGQALSQLEAEHDDRNQEHGHDDSKREYSMGNDIPQAAAESSAADAIIDAGRIRALKL
ANFFAAQAEQAAGVLVESSKRKRDDCSVLEAPDLKRPAGDVVGLKLAADPTFAISAPLLA
MDGNATETIMCPPDKVGRIIGRAGATIRDLEASTSTRIQVDHKAPGDKPVVVSGRRDDVD
RAKRAVHDLISGATETTSPSTNEVQGTVECPPGIVGRIIGRGGETIRTLQQASGAHILVN
QDFPEGVPRQIIITGAQDAVQRATSMVSELINGSNHTNTQAIIQRFGVGSTEVVECPKAM
VGRIIGKGGETIKDLQKRFNVSIQIDQGSTPCKVTITGPSPLISSARRSIEELIRTPSQP
SGGGIRPGPSFTTSYTQPNYTPYGAYGGFAMPQAVYPAHSGYQPYGGYSPYPNTMPTYAS
YSSVGAASDPYASVGNYSQSHYTASVSQQNAGPTTPGAAGNSSLWQILQDDQGRNYYYNS
LTGVSQWEKPADVP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggctgagggacaagctttatcacagctggaggctgagcatgatgaccggaatcaagag
catggtcatgatgacagcaaaagggagtattcgatgggaaacgatatacctcaggcagcg
gcagagtcgtctgctgccgatgctatcatcgacgctgggaggattcgggcgttgaagctg
gcaaatttttttgcagcgcaagcagagcaggctgcaggtgtgctggtggagagcagcaaa
aggaagcgtgatgattgttcggtattggaggctcctgatctcaagcgtcccgctggagac
gtcgtcggcttgaagctagcagctgatccaactttcgcgatatcagcgcctctgcttgct
atggacgggaatgccactgagactataatgtgcccacccgacaaagtgggacgcattatt
gggcgcgccggggcaaccattcgggaccttgaggcgagcaccagcacgcgtattcaggtg
gaccataaggctccaggcgataagccagtcgttgtatctggtaggcgagatgacgtagat
cgtgctaagcgtgctgtgcacgatctgatttccggtgcaactgagacaacgtcaccaagc
accaacgaggttcaggggactgtggagtgtccacctgggattgttggtcgcatcattggg
cgtggtggcgaaactatccgtacgctgcagcaggccagtggcgcccacatcttagtaaat
caagatttccccgaaggagtcccacgtcagattatcataaccggtgctcaggatgcagtt
cagcgtgctaccagtatggtttctgagcttatcaatggatcaaatcacactaacacccag
gcaattattcagcggtttggtgttggttcaaccgaagtggtggaatgccccaaggcgatg
gtgggccgaattatcggcaagggtggagaaaccattaaggaccttcagaagcggtttaac
gtcagtatccaaatagaccaaggctccacgccttgcaaggttaccatcaccggccccagt
ccgctgatctcgtcagcaaggagatcgatagaagaattgattcggactccatcacagccg
tctggaggaggtatccgtcctggtccgtccttcactacgtcatacacacaaccaaattac
accccgtatggggcatatgggggtttcgccatgcctcaagcagtttatccagcacacagt
ggatatcagccatatgggggatattctccatatccgaatacgatgccgacatatgccagc
tacagtagcgtaggtgcggcatctgatccttatgcatcggttggcaattatagccagtca
cattacaccgccagtgtctcccagcagaatgctggtccaacgactccaggagcagctgga
aatagcagtctgtggcagatcttgcaagatgaccagggtcgcaactattactacaactcc
ctcacgggtgtgagccaatgggagaagcctgccgatgtgccttga
DBGET
integrated database retrieval system
