KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_108963
Entry
VOLCADRAFT_108963 CDS       T01330                                 
Symbol
rabF
Name
(RefSeq) RabF/Rab5
  KO
K07887  Ras-related protein Rab-5A
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn04144  Endocytosis
vcn04145  Phagosome
vcn04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    VOLCADRAFT_108963 (rabF)
   04145 Phagosome
    VOLCADRAFT_108963 (rabF)
   04148 Efferocytosis
    VOLCADRAFT_108963 (rabF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vcn04131]
    VOLCADRAFT_108963 (rabF)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vcn04147]
    VOLCADRAFT_108963 (rabF)
   04031 GTP-binding proteins [BR:vcn04031]
    VOLCADRAFT_108963 (rabF)
Membrane trafficking [BR:vcn04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    VOLCADRAFT_108963 (rabF)
 Endosome - Lysosome transport
    VOLCADRAFT_108963 (rabF)
Exosome [BR:vcn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   VOLCADRAFT_108963 (rabF)
  Exosomal proteins of other body fluids (saliva and urine)
   VOLCADRAFT_108963 (rabF)
  Exosomal proteins of colorectal cancer cells
   VOLCADRAFT_108963 (rabF)
  Exosomal proteins of bladder cancer cells
   VOLCADRAFT_108963 (rabF)
GTP-binding proteins [BR:vcn04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    VOLCADRAFT_108963 (rabF)
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase GTP_EFTU MMR_HSR1 AAA_24 Gtr1_RagA AAA_16 AAA_29
Other DBs
NCBI-GeneID: 9621035
NCBI-ProteinID: XP_002948070
JGI: 108963
UniProt: D8TNV8
LinkDB
Position
Unknown
AA seq 203 aa
MAAPMPELAQQQTAKLVLLGEMGSGKSSLVLRYVKGQFFDYQASTVGAAFLTKTLPELNV
KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSPDSFTRAKSWVRELQRQGNPVMIMA
LAGNKADLESQRAVSVEEGQAYAAENGLYYLETSAKTAANVNELFEEIARKLPKPETAPR
PVQGGGIVLENQQAQDRKKSSCC
NT seq 612 nt   +upstreamnt  +downstreamnt
atggctgcgcccatgccagagctggcacaacagcaaacagcaaagctagttttgttaggc
gaaatgggatccgggaagtcgtccctggtgcttcgatatgttaagggacagttctttgac
taccaagcgtccacggttggcgctgcattccttacaaagacgttgccggagctgaacgtg
aagtttgaaatatgggacacggctgggcaagagcgctaccatagccttgcgcccatgtat
tacaggggcgctgctgcggcaattattgtatatgacatcacgagcccagactcctttaca
cgcgcgaagtcctgggtgcgcgagctgcagcggcaggggaacccagtgatgattatggcc
cttgcagggaacaaggcagacctggagagccaacgtgcggtttccgtggaagagggccag
gcctatgccgcagagaatgggttgtactatctggagacatccgcgaagaccgccgctaac
gtgaatgagctttttgaggagattgcccgcaagcttcccaagcccgagacggcacctcgg
ccagtccagggtggcggcattgtgctggagaaccagcaggcacaggaccgcaagaagagc
tcgtgctgctga

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