Volvox carteri f. nagariensis: VOLCADRAFT_108963
Help
Entry
VOLCADRAFT_108963 CDS
T01330
Symbol
rabF
Name
(RefSeq) RabF/Rab5
KO
K07887
Ras-related protein Rab-5A
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn04144
Endocytosis
vcn04145
Phagosome
vcn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
VOLCADRAFT_108963 (rabF)
04145 Phagosome
VOLCADRAFT_108963 (rabF)
04148 Efferocytosis
VOLCADRAFT_108963 (rabF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcn04131
]
VOLCADRAFT_108963 (rabF)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcn04147
]
VOLCADRAFT_108963 (rabF)
04031 GTP-binding proteins [BR:
vcn04031
]
VOLCADRAFT_108963 (rabF)
Membrane trafficking [BR:
vcn04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
VOLCADRAFT_108963 (rabF)
Endosome - Lysosome transport
VOLCADRAFT_108963 (rabF)
Exosome [BR:
vcn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VOLCADRAFT_108963 (rabF)
Exosomal proteins of other body fluids (saliva and urine)
VOLCADRAFT_108963 (rabF)
Exosomal proteins of colorectal cancer cells
VOLCADRAFT_108963 (rabF)
Exosomal proteins of bladder cancer cells
VOLCADRAFT_108963 (rabF)
GTP-binding proteins [BR:
vcn04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
VOLCADRAFT_108963 (rabF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
GTP_EFTU
MMR_HSR1
AAA_24
Gtr1_RagA
AAA_16
AAA_29
Motif
Other DBs
NCBI-GeneID:
9621035
NCBI-ProteinID:
XP_002948070
JGI:
108963
UniProt:
D8TNV8
LinkDB
All DBs
Position
Unknown
AA seq
203 aa
AA seq
DB search
MAAPMPELAQQQTAKLVLLGEMGSGKSSLVLRYVKGQFFDYQASTVGAAFLTKTLPELNV
KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSPDSFTRAKSWVRELQRQGNPVMIMA
LAGNKADLESQRAVSVEEGQAYAAENGLYYLETSAKTAANVNELFEEIARKLPKPETAPR
PVQGGGIVLENQQAQDRKKSSCC
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccatgccagagctggcacaacagcaaacagcaaagctagttttgttaggc
gaaatgggatccgggaagtcgtccctggtgcttcgatatgttaagggacagttctttgac
taccaagcgtccacggttggcgctgcattccttacaaagacgttgccggagctgaacgtg
aagtttgaaatatgggacacggctgggcaagagcgctaccatagccttgcgcccatgtat
tacaggggcgctgctgcggcaattattgtatatgacatcacgagcccagactcctttaca
cgcgcgaagtcctgggtgcgcgagctgcagcggcaggggaacccagtgatgattatggcc
cttgcagggaacaaggcagacctggagagccaacgtgcggtttccgtggaagagggccag
gcctatgccgcagagaatgggttgtactatctggagacatccgcgaagaccgccgctaac
gtgaatgagctttttgaggagattgcccgcaagcttcccaagcccgagacggcacctcgg
ccagtccagggtggcggcattgtgctggagaaccagcaggcacaggaccgcaagaagagc
tcgtgctgctga
DBGET
integrated database retrieval system