Volvox carteri f. nagariensis: VOLCADRAFT_109749
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Entry
VOLCADRAFT_109749 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VOLCADRAFT_109749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_109749
Enzymes [BR:
vcn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
VOLCADRAFT_109749
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
VOLCADRAFT_109749
3'-5' decay
Other 3'-5' decay factors
VOLCADRAFT_109749
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
DcpS
Motif
Other DBs
NCBI-GeneID:
9619657
NCBI-ProteinID:
XP_002950187
JGI:
109749
UniProt:
D8TUN5
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MADTGAEAAKDGKLASFKDFTVTEVLFEDTMTKFIALLGRFQGREDPAVLLLSRKPFDKT
DLSGLVGQGLALQRDFVNDIYSKYVGQPPAEHTTITVDLIYPATDKHIQKYRQQLRYMVR
ETPEVYERIVLPYIQSIPPARLQWVYNVLEKKKEVERLIFEDPDPQLGFMLHPDMKWDQK
QVDQLYCLAIVHRRDVPCLRSLDISHLPLLENIRDRGSKAIWDKYGVPQNSLRIFVHYHP
SYWHFHVHFIHAAMTAPGASAGKAILLDDVIDNLKTFGGDYWRKRTLTYQLGEADDLWRL
LAGADTDI
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacaggagctgaagcggccaaggatggtaaacttgcgagcttcaaggacttc
acggtcacggaggtgctttttgaggacacaatgaccaagttcattgcgttgctgggcagg
ttccaaggacgtgaggaccctgccgtacttctgctgtcacgcaagcccttcgacaagacg
gacttgagtggacttgtgggtcaggggctggctctgcagcgggactttgtaaatgacatt
tactccaagtatgttggccagccgccggccgagcacaccaccatcaccgtggacctcata
tacccggccaccgacaagcatatccagaagtaccgccaacagctgcgctacatggtgcgg
gagacgccggaggtgtacgagcgcatcgtcctgccgtacatccagagcatcccgcctgcc
cgccttcagtgggtgtacaacgttttggaaaagaagaaggaggtggagcggctgatcttt
gaggaccccgacccgcagctgggctttatgttgcatcccgacatgaagtgggaccagaag
caggtcgaccagctgtattgcctagcgatcgtacaccgtcgggatgtgccctgcctgcgc
tcgctggacatatcccacctgccgctgctggagaacattcgtgacaggggtagcaaggcg
atctgggacaagtacggcgtgccgcagaacagcctgcgtatcttcgtacactaccacccg
tcgtactggcactttcacgtgcacttcatccatgctgccatgactgccccgggtgcctcg
gcgggcaaggcgatcttgctagatgacgtcatcgacaacttgaagactttcggtggcgac
tactggcgcaagcgcacgcttacctaccagttgggcgaggccgacgacctgtggcggctg
cttgcgggcgccgacacagatatttag
DBGET
integrated database retrieval system