Volvox carteri f. nagariensis: VOLCADRAFT_117121
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Entry
VOLCADRAFT_117121 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcn03009
]
VOLCADRAFT_117121
Enzymes [BR:
vcn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
VOLCADRAFT_117121
Ribosome biogenesis [BR:
vcn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VOLCADRAFT_117121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-GeneID:
9623886
NCBI-ProteinID:
XP_002949309
JGI:
117121
UniProt:
D8TSD0
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MQAYKFVGTTGVLRASARHFLKSFYLRFASTTFQRYSLSARESSAHPTDLLPTDFASVPA
ISSSNTALSSSAVAAEPTCDVSSDADGGAGPGLGSLRDAAAVSAASAAEEGPLPPGLYVI
PTPIGNLRDITLRASDTLRRVNLLLAEDTRHTRKLLNFLGIRHLEVLSCHEHNEKQRLAR
VMQRLQQGEPVGLVSDAGMPGISDPGHIVVAAAVAAGVRVVALPGPCAFVTALVGSGLHT
GSFTFAGFLPPKSGARRQALERLAAQPGTLVLYAAPHGLAAVLRDCVEVLGGSRRCCVAR
EISKVHEEYFRSTLEGALREFGEVREARGEICLLIEGCGGPLGLRTTASSAEGGAGAGFG
TGAAAAAAGVGSGAIERVLRELLEAEMPVSAAVKEVVANLGANKKAAYTTALRLKEQLAR
KTDTTPTDDTTPT
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcatacaagtttgtcggcactaccggcgtactgagagcctctgcacggcatttc
ctcaagagcttctatctgcgttttgcctcgaccacatttcagcgatactcactttcagcc
cgagaatcttccgcacacccaactgacttgcttcctacggatttcgcctccgtcccagcg
atatcatcatcaaataccgccttatcgtcctccgcagtcgccgccgagcctacttgcgac
gtctccagcgacgccgacggcggcgctggccccggcctaggcagccttcgtgatgctgcc
gctgtctccgctgcctccgccgcggaggaaggcccgctgccgccgggcttgtacgtcatt
cccacaccaattggcaacctgcgcgacatcactctccgagcctctgacacgctgcgccgt
gtcaatctgctgctagcagaggacacccgccacacacgcaagctgctgaacttcctgggc
atacggcacctggaggttcttagctgccacgaacacaatgaaaaacagcggctggccagg
gtgatgcaacggctgcagcagggggagcccgtggggttggttagcgacgcgggcatgccg
ggcatctctgaccccggtcatatcgtggtggcggcggcggtggcggcgggtgtgcgggtg
gtggcgctgccggggccgtgcgccttcgtgacggcactggtgggctcgggactgcacacg
gggtccttcaccttcgcgggcttcctgccaccaaaatcaggtgcgcggcgccaggcgctg
gagcgccttgccgcccagcccggcaccctggtgctttacgcggccccccacggcctggcc
gccgtcctgcgggactgcgtggaggtgctggggggcagtcgccgctgctgcgtcgcccgg
gagatcagcaaagtgcatgaggagtactttaggtcgacactggagggtgcgctgcgggag
tttggggaggtacgtgaggcacgcggggagatctgtctgctcatagagggctgcggcggg
ccgttggggctgaggacaactgcttcgtcggcggaaggcggtgctggagctggtttcgga
accggagcagcggctgctgcagcgggtgttggttctggagccatagagcgggtgctgcgg
gagctgctggaggcggaaatgcccgtgtctgcggcggtgaaggaggtggtggccaacctg
ggggccaacaagaaggccgcatacaccacagcgctgagactcaaagagcagctcgcacgc
aagaccgacacaaccccgactgacgacacaacgccgacgtga
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