Volvox carteri f. nagariensis: VOLCADRAFT_117715
Help
Entry
VOLCADRAFT_117715 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn00500
Starch and sucrose metabolism
vcn01100
Metabolic pathways
vcn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VOLCADRAFT_117715
Enzymes [BR:
vcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
VOLCADRAFT_117715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ISOA1-3_C
CBM_48
Alpha-amylase
Isoamylase_C
hDGE_amylase
Motif
Other DBs
NCBI-GeneID:
9616857
NCBI-ProteinID:
XP_002950929
JGI:
117715
UniProt:
D8TX01
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MLRVPSASVGARPKHGVPLPLKCTLHQPPTVLHLSQVAERNSKQPANQHVAPIWRQCSSA
HSRHRSLVIRAQAAPAAAVPQLYTSVAPGKAHPLGPSKTEQGINFALFSRHAKSARLCLF
NEKAQQVDEIECRRTGDVFHLELVGLPGSDVRYGFKVAGDGGWDAGHRWAPGKVLLDPYA
PLVSGRRRFGVRDEVEQFKGKEGSLFLGAYDFDSPPYDWGPNYRRPGHSLKDLVIYEVPV
RCFTADPSSGLVPELRGTFAGLAAKAPYLASLGVNAVELLPVFEWDELEFRRTRNPRDHM
TNVWGYSHINFFAPMSRLAAAATEAGAAAAAAAVAGAAVAGGEGAAANGTGNGAVAVGPG
AVAKEFKNMVKTLHSYGIEVILDVVYNHTAEADDKDPYTLSFRGIDNKTYYMIDPTQFVQ
LVNWSGCGNTVNANDPTVNERGRPLDAPPLIRAISKHPLLSQTKLIAEPWDIGMYQVGSF
PNWDVWAEWNGRYRDDVRKFIKGDPGMKRAFATRLAGSADLYNNHNRRPYHSINFITAHD
GFSLYDLVSYNEKRNDANGEGNRDGTNDNFSWNCGYEGPSSDPGVSSLRQRQIRNYLVAL
MLSQGTPMIVSGDEVGKTHGGNNNWYGHDNAMAHLQWAEGEPQRDALLRFTSELIKFRRA
HPALGREHFLSPADITWHEDNWHNDESRFLAFTLHHREAGDIYAAFNAHAFAVSATLPRP
PPGRKWSRVVDTNLPAPKDFTPGGNAGVDHVYQVQAFSSIVLIANPL
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgagtgccttcagcctctgtcggggccaggccaaaacatggtgttcctcttccg
ttaaaatgtacattacaccagccacctaccgtgttacatctctcccaggttgcggaaagg
aattcgaagcagccggcaaaccagcatgttgcaccaatctggcggcagtgttcttctgcc
catagccgccataggagtcttgttatacgtgcacaggcagctccggcagcggctgtgccc
cagctttatacctctgtggcgcctggcaaggcgcatccgttgggacctagtaaaacagag
cagggcatcaattttgctcttttcagccgccacgcaaagtcggcaaggctttgtctcttc
aatgagaaggcgcagcaggtcgacgagatcgaatgtcgccgcactggtgacgtattccac
ctggagctagtgggtctcccgggcagtgacgtacggtacggcttcaaagtggcgggcgat
ggcggctgggacgcggggcaccggtgggctccagggaaagtcctcctggatccgtacgcg
ccgctggtttcggggcggaggaggtttggagtacgggacgaggtggagcaatttaaaggc
aaggaaggcagcctgttcctgggcgcgtacgacttcgactcgccgccgtacgactgggga
cccaactaccgccggccgggtcactctctgaaggacctggtcatctacgaggtgcccgta
cggtgtttcacggcagatccctcctcggggctggttccggagctgagggggacctttgcg
gggctggcggccaaggccccctacctcgcctcgttgggagtcaacgccgtggagctactg
cccgtattcgagtgggacgagctggagttccgccgtacccgcaaccctcgagaccacatg
accaatgtgtggggctactcccacatcaacttcttcgcgcccatgagccgcttggcagca
gcagcgacggaggcaggggcggcggcggcagcagcagcagtagcgggggcagcagtagcg
gggggggaaggggcagcagcgaatggaacgggtaacggggcagtagcagtgggaccgggg
gcggtggcgaaggagttcaagaacatggtgaagacgctccactcgtacggcatcgaggtt
attctggacgtggtgtacaaccacacggcggaagcggacgacaaagatccgtacactttg
tcgttccgaggtatcgacaacaaaacgtactacatgatcgatcccacccaattcgtacag
ctcgtcaactggtcgggatgcggcaacaccgttaacgcaaacgacccaaccgtcaacgag
cggggccgccccctggacgctccccccctcattcgggccatctccaagcaccccctgctg
tcgcaaaccaaactcattgcggagccctgggacatcgggatgtaccaggtcggcagtttc
ccgaactgggacgtgtgggcggagtggaacggccgctaccgcgatgacgtgcgcaagttc
atcaagggcgatccaggtatgaagcgtgcatttgcgacgcgtctggctggctccgcggat
ctgtacaacaatcacaaccgccggccgtaccactcaatcaacttcatcaccgcgcacgac
ggtttttcgttatatgacctagtgtcgtacaacgaaaagcgcaatgacgctaacggcgag
ggcaaccgtgacggcaccaatgacaatttctcttggaattgcggatatgaggggcccagc
agcgacccaggggtcagttcgttacgacagcgtcagatccgcaactaccttgtggcgcta
atgctgagccaggggacacccatgattgtcagcggtgatgaagtgggcaagacccacggg
ggtaacaacaactggtacggccacgacaatgccatggcgcatttgcagtgggcggagggg
gagccgcagcgagatgcgctgttgcggttcacctccgagctgatcaaattccggagggcg
catcccgcgttgggacgagaacacttcctgagccccgcggacatcacatggcatgaagat
aactggcacaacgacgagtctcgcttcctcgccttcaccctgcatcaccgcgaggccggg
gacatctacgcggccttcaacgcacatgccttcgccgtatccgcaaccctgccccgcccg
ccgccgggccggaaatggtctcgggttgtggacaccaacctccccgcgcccaaggacttc
acgccggggggaaatgcgggggtggaccatgtgtatcaggtgcaggccttctcctccatc
gtcctcattgccaatccgctgtga
DBGET
integrated database retrieval system