Volvox carteri f. nagariensis: VOLCADRAFT_117976
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Entry
VOLCADRAFT_117976 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K24755
WD repeat-containing protein 76
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vcn04121
]
VOLCADRAFT_117976
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_117976
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_117976
Ubiquitin system [BR:
vcn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
VOLCADRAFT_117976
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
VOLCADRAFT_117976
DNA repair and recombination proteins [BR:
vcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
VOLCADRAFT_117976
DSBR (double strand breaks repair)
Other DSBR factors
Others
VOLCADRAFT_117976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
9616009
NCBI-ProteinID:
XP_002951839
JGI:
117976
UniProt:
D8TZK8
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MVLQLNVERTATKTSCATSGAPLRAGTGVVRLISTCGGAQWLQPVIRAVGPDAAAAALAA
MPGLTDLSGRQQEEVRRTLQAAAVAAAAATAVADGTADSGSPGDTGRVDGAGDDDDDDED
NAVEVAEKVVARRQLPLRGSRTTTVNAADAKPQVRKEVGKAAADDSEVDLDKERAEIMER
NRRKLLELQLPGLVSGLAATRGHAGGGARREASQRGVGAKRSRERSQEPQPLRMSLRQRG
VAAELAAGIEHERSTGVLLAGGPLAAEAEGNLPFRSGNGDEETDAAFLAVLKERAMTATS
STTAAAAAAGAARRVAAAAAAAGGGAGGGRPPGAVLSGIHLVERDVAKVTKDGVTHLAWL
PDSDRLTLAAADKSGKVSLWDVDVEAGGPAEKTAGILMFQPHSEYVSGLRWLGRDAAVGP
CRLITTSYDGSVRALDLGGSGMWVELPAPGDPRSREFSALDVSSDGRTAYLGDPQGNLDL
VDLRAPPPRRERSSDPAATSVGPLGGLQISQRKINSVHLEPFREILLASTSSDGSICIWD
VRKVSHKPLSVLHHARSCHSAYWAHDGSTVLSIPHNNQTGRWITPFRAVWNAACDAVLVG
NMSRGVDIFGGLGAVVVGAAAAVKNNVDSSEVEAEADTDGDDVDDPDQKLRGRAKTSKRK
AAGKASATAAAVKAGGGGDDPLQVQFLHTLTSEYMTAIPSRLACHPTMPVVVAATCSGRC
HVWSARVGSTQHKSVSLVCSRPRLRLPKLYAATLQQLHPGMALQ
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgcagctcaatgtcgaaaggacagcgacaaaaacaagctgtgcgacatcaggc
gcgcctttgcgggctggcacgggcgttgtaaggctcatatcaacgtgtggaggtgctcaa
tggctgcagcccgtgatacgggctgttgggcccgacgcagcggcggcggcgctggcagcg
atgccaggcctgacggacctcagcggacggcagcaggaggaggttcgtaggacgcttcag
gcagcggctgtagcggcggcggcggcgacggcagtagcagatggtacggccgactcgggg
agccctggcgacactggcagggtggatggcgccggtgacgatgacgatgacgacgaagac
aacgccgtcgaggtagcagagaaggtggtggcccggcggcagttgccgctgcgcggcagc
cgcaccacgacagttaatgctgcggacgcaaaaccacaggtgcggaaggaggttggaaag
gcggcggcggacgattcagaggtcgatctggacaaggaacgcgcggagatcatggaacgg
aatcgtcggaaacttctggaattgcagctgcccggcttggtttcggggctggcggcgaca
cgagggcatgctggcggcggcgcccggcgtgaagcgagccagcggggcgtcggcgccaag
aggagtcgagagaggtcgcaggagccgcagccgctgcggatgtcgctgcggcaacgcggc
gtggcggccgagctggcggcaggaatcgaacacgagaggtcgacgggtgtgctgctggcg
gggggcccgctggcggcggaggcggaggggaacctgccttttcgaagtggcaacggcgac
gaagagacggatgcggcgttcctagccgtactgaaggaacgtgccatgaccgccactagt
agtacgactgctgctgctgcagccgcgggtgccgctagaagggttgcagcagcagcagca
gcagcgggaggaggagcaggaggaggaagaccgcccggagcggtcctaagcgggattcat
ttggtggaacgcgatgttgccaaagtgaccaaggatggtgtcacacatctggcctggttg
ccagatagcgatcggctgacgctggcggccgcagacaagtccggcaaggtgtcgctgtgg
gacgtcgacgtggaggcgggcggtccggcggagaaaacagctggcattctcatgttccag
ccccactccgagtatgtgtccgggcttcgctggcttggtcgggacgcggccgtgggccca
tgtcgcctcatcaccacctcgtacgacgggtccgtcagggcccttgacctgggcggctcg
ggcatgtgggtggagctacctgcaccgggtgacccgcggagtcgtgagttcagtgctctg
gacgtctcttccgacggccgaacggcgtacctgggggatccgcaggggaatctggatctc
gtggatctgcgcgcgccgccgccacggcgggagcggtcgtcggatccggcagcgacgtct
gtggggcctctaggtggtttgcagataagccagcggaaaatcaattcggtgcatttggag
cctttccgcgagatcctcctggcatccacttcgtctgatggttccatatgcatctgggat
gtacggaaggtttctcacaagccgctcagtgtgctccaccacgccaggagctgccattcg
gcgtactgggcgcacgacggttccacggtcctttcaattccccataataatcagacggga
agatggatcacgccgttcagggccgtatggaacgctgcctgtgatgccgtactggtcggc
aacatgagtcgcggtgtggatatctttggcggtctgggcgcggttgtggttggggcagct
gcggccgtgaagaacaacgttgacagctccgaagtggaggcggaggcggatacagatggt
gacgatgtcgatgaccccgaccagaagctacgcggccgcgccaagacctcgaagaggaag
gccgctggcaaagcgagtgcgacggcggcggcggttaaggccggaggcggcggcgatgat
ccgttgcaggtgcagttcttgcacaccctgacctcggagtacatgacggccatccccagc
cgcttagcttgccacccgacgatgcctgtggtggtggcagcgacctgcagcggccgctgc
cacgtctggagcgcaagggtcgggagcacacagcacaagtcggttagtcttgtgtgctcc
cgaccccgactcagactgccaaaactctacgcagccactctgcagcaactccatccgggg
atggcgctgcagtga
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integrated database retrieval system
