Volvox carteri f. nagariensis: VOLCADRAFT_118317
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Entry
VOLCADRAFT_118317 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_118317
Enzymes [BR:
vcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
VOLCADRAFT_118317
DNA repair and recombination proteins [BR:
vcn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VOLCADRAFT_118317
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
9622325
NCBI-ProteinID:
XP_002953383
JGI:
118317
UniProt:
D8U3Z3
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MRLRVLTWNINGLRRVVAVFGGLQRLLEALAPADVVCFQETKLTRVDLQRELALADGWES
FFAFTRGKVGYSGVATFCRRDRALPLHAEEGFTGVLHLTSEGLHPRWQAAGCSPEQLRNL
DGEGRVVITDHGGFVLVNVYGPAITSEERAEERMSYKLQFYRALQLRLDGFLAEGRRVLL
VGDLNIAPDYMDVCGATPRDFNACRADRAWLRGLLRRGEDCGGAGRPGATGRGLWDRRQQ
QQQQQPQRAETAAEHRWLRRHSGSSGATAQVRAGGEVAKMEEEEGEEVGEGEGSDAGLPP
FVDAFRAFHPKRQHAYTCWNTSSGARVNNYGSRIDHVLVADGTRSYSTGCGGFPSDAAGA
YGAVTDSTHVAVDVAALPAGSPRTGPPGVLCPPWVVMADIIPEFQGSDHAPAWVELELPD
DLLMAPGVVVLVLVLVLVLVVLVLVLVVLVLVLVLVLVLVLVLVLVLVLVLVLVLVLVLV
LVLVVVLVLVVVLVLVVLVLVLVLVVLVLVVLVLVLVLVLAASAASAGRPPPPPSLAGAS
PDLGTGQQQSHQSLATEMLIIDPAEEVEGATAAAAAATTVVEAAAAAAVEMGLRTAAAAV
EVQVAAAAESPGPSQAALAWRQIQDQMKPPRCSGHKEPCAVRTVKKRGDNNGRQFWCCAR
PDGLPPNGRCDFFQWARCRNPPTTTAPGSEPGSESGMADRGIIAN
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgcggctccgcgtgttgacatggaacattaacgggctgcgccgcgtcgtggccgtgttc
gggggtctgcagcggctgctggaggcgctggcgcccgcggacgtggtttgcttccaggag
accaagcttactcgggtggatctacagcgggagctcgctctggcggatggctgggagtcg
tttttcgccttcacccgcggcaaggtgggatactcgggtgttgccacgttctgccgccgt
gaccgcgccctgccgctgcacgccgaggagggcttcaccggggtactgcatctgacatcc
gaaggactacacccccgctggcaggccgcgggctgtagtccggaacagctccggaacctg
gatggggaggggcgcgtggtgatcacggaccacggcggctttgtgctcgtcaacgtgtac
ggcccagccatcaccagcgaggagcgtgcggaggagcgtatgtcgtataagttacagttt
tatcgggcccttcagctccgtctggacggcttcctagcggagggtcgccgtgtgttgctt
gtgggggacctcaacatcgccccagactacatggacgtgtgcggagccacaccacgagac
ttcaatgcttgcagagctgaccgcgcctggctaagggggctgctgcggcgcggcgaggac
tgtggcggtgccggtagaccaggagcaacgggaagaggcctctgggaccgacggcagcag
cagcagcagcaacagccacaaagagcagagacagcggcagagcatcggtggctgcggcgg
cacagcggcagcagcggcgcaacggcgcaagttagagcgggaggcgaggttgcgaagatg
gaagaggaggagggggaggaagttggagagggggaaggcagcgatgcggggcttccaccc
ttcgtggatgccttccgtgcattccaccccaaacggcagcacgcctacacatgttggaac
acgagctcgggagcaagggtcaacaattacggctcccgcatagatcatgtgctggtggcg
gatggcacccgcagctacagcactggctgcggcggctttcccagcgatgccgctggcgcg
tacggtgctgttacggattccactcacgttgcggtggatgtagctgcgttgccagcgggc
tcacctcggacagggccgcctggcgtactgtgtcctccctgggtggttatggcggacatc
atcccggagttccaaggcagcgaccatgcaccggcatgggtggagctagagcttccagac
gacctcctgatggcccctggtgtggtggtgctggtgctggtgctggtgctggtgctggtg
gtgctggtgctggtgctggtggtgctggtgctggtgctggtgctggtgctggtgctggtg
ctggtgctggtgctggtgctggtgctggtgctggtgctggtgctggtgctggtgctggtg
ctggtgctggtggtggtgctggtgctggtggtggtgctggtgctggtggtgctggtgctg
gtgctggtgctggtggtgctggtgctggtggtgctggtgctggtgctggtgctggtgctg
gccgcatcggcggcatcggcaggaagaccgccgccgccaccatccctagcaggcgcgtcc
ccggacctgggaactggtcagcagcagagccatcagtcattggcgaccgagatgctaata
atagatcctgcggaggaggtagaaggagctactgctgctgcagcggcggcgacgacagta
gtggaagctgcggcagcagcggcggtagagatggggttacggacggctgccgctgctgtg
gaggtgcaggtggcggcggcggcggagtccccgggtccctctcaagcggcgctcgcatgg
cgccaaatccaggaccagatgaagccccccaggtgcagtggccacaaggagccctgtgcg
gtccgcaccgtcaagaagcgcggcgacaacaacggccgacagttctggtgttgcgctcgc
cccgacggactgccgcctaacggccgctgcgacttcttccagtgggcacggtgccgcaac
cctcccacaacaacagcaccaggatcagaaccaggatcagaatcaggaatggcagacaga
ggcattattgcgaactaa
DBGET
integrated database retrieval system
