Volvox carteri f. nagariensis: VOLCADRAFT_118442
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Entry
VOLCADRAFT_118442 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_118442
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_118442
Spliceosome [BR:
vcn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
VOLCADRAFT_118442
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
VOLCADRAFT_118442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
Lsm_interact
HAT_Syf1_CNRKL1_C
TPR_14
Motif
Other DBs
NCBI-GeneID:
9616511
NCBI-ProteinID:
XP_002953635
JGI:
118442
UniProt:
D8U4W3
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MAAKDGDGKLSSDVTEPTDAEGLKSNKGKASSVDAPNVDSGGGNISSDDSEDGSDDSSGD
IDVDAETAQQLMALEHELQINVSYEKHLEYIALLRTAPGLRKRLRDAHEDLAARFPLSEE
LWLAWINDELSAVSGPEDLAWLLGLLRRAATRDYLAPAVWELYLEVAHDLDPAVRDLEPE
GVERYRAICEEALAAAGLHLAAGHRLWSKYRTFELAVEARAAGGTSAAAARQQDRVRALY
QRQLQVPLQDVDQTLEEYKAWEAGHGKSVPAHVVKAADKAREAAELRAGFEEGVAAEVPA
DVSKLGAFLSYIKMEQNAGDTARVQVLYERAVAAFPLTYSLWLQYGQYMETHTKLAGPIN
AVYGRAVRNCPWVAAVWERAIRALDRTGAPLEAVDEMYGNALKAGLQHSTPQSGCSSSNR
CRPLILPILTVGLRTRFPYRVPKQAPDDYLAIILSRIDCLRRAAVAAKEAAAAGGGSGTG
GGGSSKKEAAAAAAAVAAAFSRLRLAFCSATELMMSHFPDHLDLSLSLPAYWAQCEMYVM
CDTAAAREVWEGSLKGGLGRYAEAWEAYIAMERSARLIKEARALYKRCYSRRLEQDGQLK
LCQAWLRFEREEGRADDYLQALLKVEPILEESAAAAATAADQAAAAAAKAAVQKAKNLSK
DEVKAMRRAKDPNFKGKKDTAEKGEAEMENPDKGGKPAKRGRHEDGQDPAPVGSAEELAS
IKRVRMHEPEAPSPRAKAGAQVPTDNNATAPAAAAEGGDQDADMADEEEAHADGAADANA
GAEGMGEDNAAGPGPGTAKTQGGARPHYTDKMTVFIRGLLPGVKDVDLEGFLKGHVPEGL
KDSRIMRDAQTGDARGFAYVECSSREALDKLVALNGTVFQGKSLFIAESKPPKHGGGGRG
PPHGGGGRGRFSGGRFGGPPGARGGGFAGRGRGRGRGGGGGSAEGDPDTEMEEAGDGGGG
GGGGGGRGGRGGHRPGLGHPSGRGSMRTHLQISQGSAPPTALVPRSLQLSVSFGAPAGGD
AGSGGGGGAAAGGQQLSNDDFRRMLLSGKK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaggacggcgatggaaagctatcttccgatgttacggagccaacggatgcg
gagggcttgaagtcgaacaagggcaaggcgtccagcgtagacgcaccaaacgtagacagc
ggcggcggcaatatcagttccgatgacagtgaagatggtagcgacgacagcagcggcgac
atcgacgtggacgccgagactgcacagcagctcatggcgttggaacatgaattacaaatc
aatgtatcatatgaaaagcacctcgagtacatcgcgttactccgcaccgctcccggcctg
cgcaagcgcttacgagacgcacacgaggacctcgcggctcgcttcccgctgagcgaagag
ctttggttggcctggataaacgatgagctgtcggcagtttcggggcctgaagatctcgcc
tggctgctggggctgctgcgccgagcggccactcgggactacctggcgcctgccgtgtgg
gagctgtacctggaggtggcacatgatttggatcctgccgtaagggatctggaacctgag
ggtgttgagcgttaccgggccatatgcgaggaggcgttggcagcggctgggttgcacctg
gcggctggacaccggctgtggagcaaatacaggacgttcgagctggccgtagaagctagg
gcggctggggggacttcggcagctgccgccaggcagcaggatcgagtgcgggcgctgtac
cagcggcagctgcaggtgccgttgcaggacgtggaccaaacgttggaggagtataaggcc
tgggaggcaggccacggaaagtccgtaccggcgcatgtggtcaaggcggctgataaggcc
cgggaagctgctgagctgcgtgccgggtttgaggagggcgtggcggcggaggtgccggct
gacgtgtcaaaactgggcgcgtttctgtcgtacattaagatggagcaaaatgcaggcgac
acggcgagggttcaggtgctctacgagcgcgccgtggcggcgtttcccctgacgtacagc
ctctggctgcagtacggacagtacatggagacgcacaccaagctggccggccccatcaac
gccgtgtacggcagggccgtacggaactgcccctgggtggcggccgtatgggagagggcc
atccgagcgctggaccgtaccggtgcgccgctggaggcggtggacgagatgtacggcaat
gcgctcaaggccggtctgcagcacagcacaccgcaaagcgggtgctcttcctctaaccgc
tgtcgcccgctcatcttgcccattctcacggtcggtctccgtacccgcttcccataccga
gtgcctaaacaggctccggacgactacctggcgattatcctgtccaggatcgactgccta
cgaagagcggcggtggcggccaaggaagccgctgcagcgggcggcggcagcggcaccggc
ggcggtggcagctctaagaaggaagccgctgccgctgccgcggccgtggcggctgcgttt
tctcgcctgcggctggcgttctgctccgccaccgagctcatgatgtctcactttcccgac
caccttgacttgagcctgagcctacccgcctactgggcgcagtgcgagatgtacgtcatg
tgtgatacggcggcggctcgggaggtgtgggagggctcgctcaagggaggactgggcagg
tacgcggaggcttgggaggcgtacatcgcgatggaacgctcggccaggttgatcaaggag
gctcgggctctgtacaagaggtgctacagccggcgactcgagcaggatggacagctaaag
ctctgccaagcctggcttcgtttcgagcgggaggagggcagggcggatgactacctgcag
gcgctgctgaaagtagagcctatcctcgaggagagcgccgcggccgctgcgaccgctgcc
gaccaagctgcggcagccgctgcaaaggcggctgtacagaaggcgaagaatctgtctaag
gacgaggtaaaggctatgcggcgggccaaagaccccaacttcaagggcaagaaggacacc
gctgaaaagggcgaggctgaaatggagaatcctgataaaggtgggaaacctgccaaacgt
ggccggcatgaggatggccaggacccggcacctgtaggtagtgctgaagaacttgcctcc
atcaagcgcgttcggatgcacgagcctgaggctccctctcctcgcgccaaggcgggcgcg
caagtcccaacagacaacaacgccaccgctccagctgccgcggccgaaggaggcgatcag
gatgctgacatggctgacgaggaagaagcccacgcggatggagccgcggacgcaaatgca
ggcgccgaaggcatgggcgaggacaacgcagctggcccggggccgggcacggccaagacg
cagggcggtgcgcgtccgcactacacggacaagatgaccgtcttcatccggggccttctt
cccggggttaaggacgtcgatttggagggctttctcaaaggccatgtgccggagggcctc
aaggacagccgcatcatgcgtgacgcgcagacgggtgatgcacggggttttgcgtacgtg
gagtgcagctcaagggaggccctggacaagctggtcgccctcaacggcaccgttttccag
ggcaagtcacttttcatcgccgagtccaaaccacctaagcacggcggcggcggcaggggg
cccccgcacggcggtggcggccgcggccgcttcagtggagggcgcttcggcggtccaccg
ggcgcgcggggtggcggctttgcagggcgcggccgcggccgcggccgtgggggtggcggt
gggtcggcggagggcgatccagatacggaaatggaggaggctggcgatggcggtggtggt
ggtggtggtggtggaggccggggtggccgaggggggcaccgtccggggctggggcacccg
agcgggcgcggctccatgcggacacatttgcagatttcccaagggagcgccccgcccacg
gcacttgtgccccgttctctccagctgtcggtctccttcggcgcgcctgccggcggcgat
gctggcagcggcggcggcggcggcgcagccgccggcgggcagcagctatctaacgatgat
ttccgcaggatgctgctgtccggaaagaagtag
DBGET
integrated database retrieval system
