KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_118782
Entry
VOLCADRAFT_118782 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
Organism
vcn  Volvox carteri f. nagariensis
SSDB
Motif
Pfam: DUF2207_C FAM176 YfhO RNA_pol_Rpc4
Other DBs
NCBI-GeneID: 9625026
NCBI-ProteinID: XP_002954576
JGI: 118782
UniProt: D8U7D9
LinkDB
Position
Unknown
AA seq 2538 aa
MEGLGSGISGPLRLATKANWKLGENLALSHLSALPELPQNNADDYRLQQLQYAMHLDSSM
ITYTPDIGVLRNGDQEQVASRFDDSRNVKRKIFVNKENPRRRAPCIIITIPVVKHNPNPK
SKIQKKPSMYEYGVLERLVSVAEELNKAQAQIEIRKVLKREYKRQDRWGYFRAMQRLMPA
ANGVRPGHIAFGTYAPGGPVAAAAAAAAAGTRMRPRANGAAAMKATKQPLQRDVDRQAEA
VLGGGDVAAVEGAEEDGQLAAAAAAAAAAAGGSSLSLSCGGDDALSRLDAAVEAAVQASQ
VREARRAAARQLAEEEGLPSETWWDIMQKWVRGRGEMVWVLVLVLVLVLVLVLVLVLVLV
LVLVLVLVLVLVLVLVLVLVLVLVLVLVLVLVLVQLPQILVLHPHDDEEEAEGEEEEEED
EEEEKDGGSEEEEDEAARRLRRRRERNEARKARKAAADAAAGEGEGGGGGQGGARKKKSK
GRGRAGGAGLIPTSKMTMLVKVVKEAMAAARAMEAEDDEKGSGKAHHHHRRKNRRGGGGG
GGDDPATSMRMLTAAAAALNMSVEAYVAMRNRKMGVTALKPWQPPPFPLLIEADGKPIAL
EEHELRQMEQEARQELLEKAAMDFVAAATSASAATSSLDTSTISGSTISASASASASASA
SADASSVHTWGSAAAAALGGGGGGGGGSINGRQLLQSLSVSGARSAAEAAAAFAAAAAPS
LTIPEDDVWSLVKEKLRQRMAARAGGTNGGGGSAAAAISTAGATAASIRASLFDSESDYD
DSEYDSSGEPKRRQRDELTSRERATVRAAAWSKGAQVPGAVFTQYGWLETLPDPQLLPAL
EAYVRRLGIPRDGSTPQQQQQPHPHPHHRPAARAHMQPLMRRTASPYDGQQRPVSPGRGG
GAAARSPPGPNSVAAILGATSAGFFVTHAPIAPHPPSAPPARPPRGGAAAAAAAAARARG
GFEDDPPPPPPAPAAATRPSGLFAFSPGSGVPAVVGRALGSPATSPTNSSRSLLSQMRSG
GEGQGLAAAGPGGVSSGGRSFSTSRRALSPTGPQGMGEEGSTGSDGGGGGGGGGGVVLGV
SVSISPRAHGGGHGGVSWRAGAASRRSPSGAAAAAAAGGSGGAAISEEAGSSGGSRSHGD
AEGEDGDEAQQHHQQQQQQQQQQQEVEGVEEEVAAPPALSGEPFQAGASDDHCVPLSALG
IFESSDARGKPIRLVMRLAICWGRSLVTAFLTVAMAVLRSKSIKPGVAERVFPQGQAHIN
DPSSSVVPPSPTRRDGDDAGEGADGADGADGGGPASNPLDNISSSSSTSSDEDADGWATA
SDDFDSSDKGSGATAAAAAAAAAAAEADKGSPIDDAGNGYPDEAGVMMAVGHALATTSTR
VHPPQPAAAAAAGVAEGSQRRQRPSAAQGPPGVATATAAAAAAATTGPYVRRRVAPLPLV
IPEPRPNALHDAATTAAAAAADGRGRPLEDEDGERQFDLLYDMTRWAVARPSTPINYRLE
DEHVSVVLRRNKEARRREAEAAHQARRAHLLMMYGGGGAVYGGNAYERVMFRRRHARALA
ALAASQSPLAKLLRALAFDRETLGKAVVQQHGSGSGGGSTALTASGAASSAGTTSGGGIR
QPRRRGGGGGGWRRFHPAGAVQSNLSGGISWMQSPSGRTQLRLRRGGGCTSGFGNSYYWR
QPVRLASLMHIRPAGCLDRGAEAVEGHHGGVDGGLGVRVQKAGGGPNVADPLAALQPLPP
PPPEVTKMASTALKLLGELGSEIGRMEEEIEVLQRRAERDARRQLEGGAAAPLPPSPPLP
AMAAAAAAVPLQRSPSGAQNRTQLLSLHQQHHHLQAHQAVPQPPPAAQQRPQSRSRVSPP
PPSLQRLTLTAWEPPTGVHGTAVPRIPHPQRSASPPQLRAPPGRQDATAASGPRRPALAG
GPMPTGSAAAGRGQMSTAAWRGAPAQMGRVVSPELGAVGCDGGDGGGGSPTDGDGNGDGD
GGHCHSAPLLTRNLPTSAPTQPLLPPAASGTLSPTQYKLSYIGSRSGSSSGSISVGLQSA
GNSVPLDAVLPPGHSLVAAAPPAGSDGVVGRRRTPSPALVPTPHNTLSENQGWPSSRGNS
MPGVALAALDGGGGVPAAAAAAAAAAPAWASPRRSITGLEPGGAAGVPSDVPFPRSAAAV
ASLSPPSHAHLGHMRVHPYPRNNSPPTMLPNIAVGSAGGGAAAVVPAHRPSSDGNPYGVG
VAARGSIGGWFSAGAAAGAAASAQAPPPSAPRPRPGFPPGQPEVPAAPPHSPPRAAGGSS
TTSALSAVLPEIPQTSLSPRNNSTVGTQGVRSSVSYDITVGPVGAVGGRPSTPLLGISRS
SGSPPHSPLRSYPRMELGLGAGGSPLRMRHGSYTGPGVPYYQHLAGGGVGAASATAVSHP
YTLNDAGNSGGPSGVSVESLLLNVALFGPGGLGGGGGGGSGFGNRAAAALRASATALPLL
SGSTRRPRASDASMAMPTTTTAGATLAAASSAPAATAATEGPAGGSSRFGRVRRLSMGPL
PGGPSGGVTASAAAIISP
NT seq 7617 nt   +upstreamnt  +downstreamnt
atggagggcctggggtcgggcatcagcgggcctctgcgactggcaacaaaggccaattgg
aaacttggggaaaacctggcgctgtcccacctatccgctttgcctgagttgcctcaaaac
aacgccgatgactaccggcttcagcaattgcagtatgcaatgcatttggacagctccatg
ataacctacacaccggacatcggcgtgctaagaaatggcgatcaggagcaggttgccagc
cgctttgacgacagtaggaatgtcaagcgcaaaatcttcgtcaacaaagagaacccccgg
cgccgtgccccttgcatcattatcaccattccggtggtgaaacacaacccaaatccaaaa
tccaaaatccaaaaaaagccctccatgtacgaatacggagtcctggagcggttggtgtcg
gttgcggaggagctcaataaggcccaggcgcaaattgaaatccggaaggtgctcaaacgc
gaatacaaaaggcaggaccgttggggatacttccgggccatgcagcgcctcatgcccgcc
gccaacggtgtacggccggggcacatcgcgtttggaacctacgcgccaggggggcccgtg
gcggcggcggcggcggcggcggcggcgggtactcggatgcggccgcgggctaacggcgcc
gccgcgatgaaggccaccaagcagccgctccaaagagacgtggatagacaggctgaggcc
gtcctaggggggggggatgtcgcggctgtggagggggcggaggaggacgggcagctcgct
gccgccgccgctgccgccgccgctgccgcgggcggcagctcgctttccttgtcgtgcggt
ggcgacgacgcgctgtctcgactcgacgccgcggttgaggcggctgtgcaagcgagccag
gttcgggaggctcggcgcgcggctgctcggcagctggccgaggaggagggcctcccctcg
gagacgtggtgggacatcatgcaaaagtgggtgagggggagaggggaaatggtgtgggtg
ctggtgctggtgctggtgctggtgctggtgctggtgctggtgctggtgctggtgctggtg
ctggtgctggtgctggtgctggtgctggtgctggtgctggtgctggtgctggtgctggtg
ctggtgctggtgctggtgctggtgctggtgctggtgctggtgcaactcccgcagattttg
gtgctgcaccctcatgatgacgaggaagaagcggagggggaggaggaggaggaggaggac
gaagaggaagaaaaggatgggggaagcgaggaagaggaagacgaggcggcgcggcggctg
cggcggcggcgggagcgcaatgaggcgcgaaaggctcgtaaagcggcagcggacgcggcg
gcaggggagggcgagggtggcggcggcggccaggggggcgctcggaagaagaagtccaag
ggccggggtcgtgcgggcggtgcgggactgattcccacgtccaagatgacgatgctggtc
aaggtggtgaaggaggcgatggctgctgcgagagccatggaagcggaggacgacgagaag
gggagcgggaaggcccatcaccatcatcggcgcaagaaccgccgcggcggcggcggcggc
ggcggcgacgaccctgcgacgtcgatgcgcatgctgacggcggctgcggcggcgctcaac
atgagcgtggaggcatacgtggcgatgcggaaccgcaagatgggggtgacggcgctgaag
ccctggcagccaccgcccttccccctactgattgaggccgacgggaagccaattgcccta
gaggagcatgaacttcggcaaatggagcaggaggcccgtcaggagcttctggaaaaggcc
gccatggactttgtcgccgccgctacctccgcgtccgccgccacatcgtccctggacacg
tccacgatcagcggcagtacaatatcggcgtcagcgtcggcgtcagcgtcggcgtcagcg
tcagcggatgcgtcgtctgtgcacacctggggcagcgcggcagcggcagcgctgggcggc
ggcggcggcggcggcggcggcagcatcaacgggcggcagctcttgcagtcactgtcggtc
tccggggcgaggagtgcagcggaggcggcggcggcgttcgctgcggcggcggcgccgtcg
ttgacaatccccgaggacgacgtctggtctttggtgaaggaaaaactccgtcagcgcatg
gcggcgcgtgcagggggaacgaacggcggcggcggcagcgccgccgccgccatctcgacg
gcgggcgccactgccgccagcatccgcgccagcctctttgattcggaatcggattatgac
gacagcgagtacgacagtagcggggagcccaagcggcggcagcgtgatgagctgacgtcc
agggaacgggccactgtacgggctgctgcgtggtccaagggcgcgcaggtccccggcgcg
gtcttcacccagtacggctggcttgaaacgctgcctgatccgcagctgctgccggccttg
gaggcgtacgtcaggagactgggcatcccacgcgacgggtccacgccacaacagcaacag
cagccacacccccacccccaccatcgacctgcagcccgtgcgcatatgcagcccctcatg
cgccgtactgcttctccgtacgatgggcagcagaggcctgtcagtcccggccgcggcggc
ggcgccgccgccaggtccccgccggggcccaacagcgtcgccgcgatcctaggggccacc
tccgccgggttcttcgtcacccacgcgcccatcgcgcctcacccgccgtcggcgcctccg
gcgcggccgccacgtggaggtgccgccgccgccgccgccgctgcagcccgagcacgaggg
ggatttgaggacgatccgccgccgccgccgccggcaccggcagcagcgacgaggccttcc
gggctatttgcgttctctcctgggagcggggttcctgcggtggtgggtcgggccctgggc
tcccccgcgacttcgcccactaattcatctcgatcgctcttatcgcagatgaggtcgggc
ggtgaagggcagggtctagcggcggcggggcctggcggcgtcagcagcggcgggcggtcg
ttctcgacgtcgcggcgtgccttgtccccaaccggacctcagggaatgggggaggaaggg
tcgaccggaagcgacggcggtggcggtggcggtggcggtggcggggttgtattgggagta
tcggtgtccatatcgccgcgagcccacggcggaggccatggcggcgtgagctggcgcgcg
ggtgctgcgagccggagatcgccgtctggagcagccgcagccgccgccgccggcggcagc
ggcggcgccgccatctctgaggaggctggcagtagcggcggtagccgcagccatggggac
gcggagggtgaagatggagatgaagcacaacaacatcaccagcagcagcagcagcagcag
cagcagcagcaggaggtggagggggtggaggaggaggtggcagccccacccgccctgagc
ggagagccatttcaggcaggcgccagtgacgaccactgcgttcctctttccgctcttggc
atttttgagagctctgacgcgagggggaaacccattcgcttagtaatgcgtctcgcaatc
tgttggggccgtagcctcgtaacagcttttttgacggttgcgatggcggtgctgcggtcc
aagtccatcaaaccaggcgtggcggagcgggtctttccgcagggacaggcgcatatcaac
gacccgtcatcaagtgtcgtaccgccgtcgccgacgcggcgtgacggcgatgatgctggt
gaaggcgctgacggcgctgacggcgctgacggcggcgggcctgcgtcgaaccccttggac
aacatcagcagcagcagcagtacgagcagcgatgaagatgccgacggctgggctacggcg
tcggacgattttgacagctcagataagggaagtggtgctactgcagcagcagcggcggcg
gcggcggcggcggcggaagcagataagggaagtccaattgacgacgcaggcaacggttat
cccgacgaagcgggggtgatgatggcggtgggtcacgcactcgcgacgacgtctacgaga
gtgcatccgccgcagccggcggcggcggcggcggctggcgttgccgaaggctcccagcgg
cgtcaacgtccgtcggcggcccaaggtccccctggagtggcaactgccactgcggcggcg
gcggcggcggcgacgacggggccgtatgtacgtcggcgggtagcgcctctgccgctggtt
atccccgaacccaggcccaacgcgttgcacgatgccgccaccacggcggcggcggcggcg
gcggacggacgagggcgaccgttggaggacgaggacggcgagcggcagtttgacctgctg
tacgacatgacgcgttgggcggtcgcgcgcccgtcgacgccgatcaactacaggttggag
gacgagcacgtgtctgtcgtactgcgccggaacaaggaagcgaggcggcgtgaggcggag
gcggcgcaccaggcgcgtcgcgcccacctgttgatgatgtacggcggcggcggagcggtg
tacggcggcaacgcgtacgagagggttatgttccgtcgccgccacgcgcgggccttagca
gcgctggcggcttcgcagagcccgctagcaaagctcctgcgcgctttggcgtttgaccgg
gagaccctaggaaaggctgtcgtacagcagcacggcagcggcagcggcggcggctccaca
gcactcactgcctccggcgccgcctcatccgccggtacgacatcagggggtgggatccgc
cagcctcgccgccgcggcggcggcggcggcggttggcgtcgctttcaccctgccggtgcc
gtacaaagcaatctgagcggcggtattagctggatgcagtcgcccagcggcaggacacag
ctgcgattacggcgtggtggcggctgtacgtcgggctttggaaacagctactactggcgc
caacctgtacgactcgcctcgctcatgcacattcggcctgcgggctgcctggatcgcggg
gcggaagccgtcgagggccatcacggcggcgtcgacggcggcctcggcgtcagggtccag
aaggccggtggcggaccgaacgtggcggaccccttggcggcgctacagccgctgccgccg
ccgccgcctgaggtaacgaagatggcaagtacggcactcaagctgctcggtgagctcggc
tctgagatcgggcggatggaggaggagattgaagtgctccagcggcgagcggagcgagac
gcccggcggcagctggagggcggcgccgccgcgccactgccgccgtctccgccgctacca
gccatggcggcggcggcggcggcggtgccactgcagcggagcccgtcgggtgcccagaac
cgcacgcagctgctcagcctccaccagcagcatcaccacctgcaagctcatcaggcggta
ccgcagccgccgccggcagcgcagcagcggccgcagtcgcggagccgcgtatccccgccg
ccgccctccctgcagcggctgacgttgaccgcctgggagccgccgacgggtgtccacggc
accgccgtaccgcggataccgcaccctcagcggtcggcgtcgccgccgcagctccgagcg
ccgccaggccgtcaggacgccaccgctgccagcggtccccgccggccggcgctggcgggg
ggcccgatgcccaccggctcggcagcagcgggccgcggccagatgagtacggcagcttgg
cggggcgcaccagcgcagatgggtcgggtcgtgagcccggagcttggcgccgtcggttgc
gacggcggcgacggcggaggcggctctccgacggacggcgacggcaacggcgacggcgac
ggcggccattgccactcggcgccactcttgacccgaaacctaccgacatcggcgccgacg
cagccgctactgccaccagctgcatccggaacactcagccctactcagtacaagttgtcg
tatattggatccagatctggatccagctcgggatccatctcagtgggactgcagagtgcc
gggaactcggttccgctggatgccgtactgcctccgggccattcgctggtggcagcggcg
ccgccggcgggctccgacggggttgtcggtcggcgacgaacaccaagcccggcgttggtg
cccacaccccacaacacactgagcgagaaccagggatggccgtccagccgcggcaactcg
atgccaggagtggcgttggcggcgttggacggcggcggcggcgtccccgccgccgccgct
gcggcggcggcggcggcacccgcctgggcttcaccgcgacggtccatcacggggttagag
cccggcggcgccgctggcgtcccatcggacgtgccgttcccaagatcggcggcggcggtg
gcgagcttatcgccgccgtcacatgcgcatttgggtcacatgcgagtgcatccctacccg
cgtaacaactcgccaccgacgatgctaccgaacattgccgtaggtagtgccggcggcggc
gccgctgcggtcgtacccgcacatcgaccgagctccgacggcaacccgtacggcgtcggt
gtggcggcgcgcgggagcatcggcggctggttttcagccggcgcggcggccggtgcggcc
gcttcggcacaggcgccgccgccgtcagctcctcggccgcgtccgggctttccacccggt
caaccggaggtccctgcagcgccaccgcattcaccgccacgagcagccgggggtagcagt
acgacatctgcgctaagtgccgtactgcctgaaattccgcaaacgtccttgtcaccgcga
aataattccacagttggcacgcagggcgtacggagctccgtgtcgtacgacatcaccgtc
gggcccgtgggcgccgttggcggccgtccttcgacgccgttgttgggtatatcgcggtcc
agcggatcgccgccgcacagccctcttcggagctacccccgcatggagcttggtttagga
gcgggcggctcgccactccgcatgcgccacggctcgtacactggccctggcgtgccgtat
taccagcacttggcgggtggcggcgtcggcgccgcctccgccactgccgtaagccatcca
tataccttgaatgacgcgggtaatagcggggggccgtccggcgtcagcgtcgagagcctc
ttactcaacgttgcgcttttcggtcccggtggccttggcggcggcggcggcggcggcagt
ggatttggaaaccgggcggcagcggcgctgcgcgcgtcggcgacagcgctgccgctgctt
tccggcagcacccgtcgtccgcgcgcctctgatgcgtccatggcgatgccgacgacaacg
acggcgggggcaactctggcggctgcgtcctcagcaccggcggcgacggcggcgacggag
ggccccgccggcggctcgtcgcgctttggccgtgtacggaggctcagcatggggccattg
cctggcggtcccagcggcggggtcaccgcctccgccgcggccataatctcgccgtag

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