Volvox carteri f. nagariensis: VOLCADRAFT_118894
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Entry
VOLCADRAFT_118894 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K01192
beta-mannosidase [EC:
3.2.1.25
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
VOLCADRAFT_118894
Enzymes [BR:
vcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.25 beta-mannosidase
VOLCADRAFT_118894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIA
RskA
FHIPEP
Ctr
Motif
Other DBs
NCBI-GeneID:
9621783
NCBI-ProteinID:
XP_002954981
JGI:
118894
UniProt:
D8U8F4
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MPLQRIPNSSATGSPTGALNRLLVAIVLLGKLLLGTCPADAVHSTSFSLRHLHATDNSTP
PIPANISQSPPAATAATDATCNCLGSCCCLFLPSQYANDTASAHSCSPWIYAAAQLAAAD
ASAVCAAAMGMGTQPLAQQSWRRQTNVAAGTVNTLDLSGPAGPSWSLSNANGSVTLGSVA
VPGYALAALWDAGLLGAPAGDRKSDPLYRFNELEFRWVAMDTWTFSTTFTLPPTPGTAAA
PAAEGAGGGAGGGGVVGADGCGWDLVLDGVDTVADVLLNGQMLSQLKNFHRSYRLDVRQI
LQAADQDANNLSIVIHPAVPYIRQKAAAYPYPLPSNTAPGSFGQFAFVRKPASDMGWDWG
PAFAPAGVHGAVRLVRYCAPYMTGLHVVQQVHRTSPPGGAADDDGDGARSGGDGGGNDSQ
SGAISLVLEAESQEQQLDMGASSPPGSSANDFEAAASIPAAATVVIELWDPYGDGDGGGS
DDGSRRVLGRVEEPLGQQSPGITVGGTQFVRLQMDLDATAVRLWWPVGFGAQPLYTLAGW
VQQQQQGQQEPEEQPQPPSPLPGGQQQQQQQQQQQAPRSEEKLLQAEAGTGANWDTAVGS
SGGGGSGWRTAFGGQRQPHIRRRVGFRTVELVTVPLDDVMAELVDLGSGTETKGGTTGTG
SVNTSGPPGRPPGSATSSFPQAPNETFFLRVNGQPLFARGANVIPLHILHTMTPTIARSS
ANSSSSSANGTDPWDVGRAKKEQQEGIAGLLAAALGSGMNMLRVWGGGRYQLDELYDMAD
GAGLLIWQEFMFACNPYPNTLDMNAEVQHEAAEQVRRLAGHPSIAIWGGNNEVETSFDWF
DETRANRPLYVADFVAQFVELLGGVLQQLDPGRPYVDSSPSSGLYSRLPYIKRWGNAGDQ
AAGDVHYYNYKDDCLDPGIYPMARFVSEYGYQSFASYEVIRQYGEPSDFMPLSEFMRHRQ
RHPNGEAELIASLTSHFRQPPGGWAPGGGGGGVSSAAAAVAAAAAMARAARAARAAMVGK
QLQQQQQQQQQQQQQQQQQQQQQDEANNTKVDPLHLYKAWIYQLQTQQALCYSTAIGRWR
SLRSDPRVMSMGVLYWQLNDIWPGYSWSSLDYGGSWKPLHSIVRRTFAPVTIVASYYKRR
SGNVTAYVINDGPQEVAVQLIVTVISLAPCPAVAGGGGGVAANTSRTTGGGGGGGSVSGS
GGGCSGDAAGEAR
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgccactgcagcgcatcccgaactcgtcagctacaggatcgccgacaggcgcactcaac
cgtctcctggtcgcaatcgtccttctcgggaagctgctgctgggcacatgcccggccgac
gccgtacattccacctccttcagcctccgtcatcttcacgccacagacaactccaccccg
ccaatccccgccaacatctcccaaagccctcccgccgcaaccgccgccactgacgctacc
tgcaactgcctaggaagctgttgctgcctcttcctcccttcacagtacgccaatgacacc
gcaagcgcacactcctgcagtccttggatttacgccgccgcgcagctggcagcagcagat
gcctcggctgtgtgcgcagcggcgatggggatgggtacacagccgctggcgcagcagtcg
tggcgcaggcaaaccaacgtcgccgcaggcaccgtcaacacgctggatctatccggcccc
gccgggccatcatggagcttatccaatgccaacggtagcgtgacactggggtcggtggcg
gtgcccggctacgcgcttgcggcgctgtgggacgccggtctgttgggggcacccgccggg
gatcgcaagagcgacccgctgtacaggttcaatgaacttgagtttcgctgggttgcgatg
gacacttggacgttctccacgaccttcacgctgccgccgacacccggtacggcagcggcg
ccggctgcggaaggcgccggtggcggcgccggcggcggcggggtggtgggcgccgacggc
tgcgggtgggatctggtcctggatggggtggatacggtggcggatgtactgctcaacggt
cagatgctgtcccagctcaagaactttcacagatcgtaccgactggacgtacggcaaata
ctacaggcggcggaccaagatgccaacaatttgtccatcgtcatacacccggcggtgccg
tacatacgacagaaagcggcagcctatccgtacccactgccgtccaatacggctccgggc
tctttcggccaattcgccttcgtacgcaagccagcatccgatatgggttgggattgggga
cccgcattcgcacccgctggcgtacacggcgccgtacggctggtgcggtactgcgcgccg
tacatgacagggcttcacgtggtacagcaagtgcatcgtacatccccccccggcggcgcc
gccgacgacgacggcgacggcgcccgaagcggcggcgacggcggcggcaacgattcgcaa
tccggtgcgatcagcctggtgctggaggctgagtcgcaggaacagcaactcgacatgggg
gcatcatcaccgccgggatcgtcggcgaacgacttcgaagcggcagcgtcgatcccagcg
gcagcgacggtggtgattgagctttgggatccgtacggtgacggcgacggcggcggcagc
gacgacggatcgcggcgcgtcctgggccgggttgaggaacccctaggtcagcagtcccct
gggataactgtcggagggacacagttcgtgcggctgcagatggacctggacgccacggcg
gtacggctgtggtggccagtgggtttcggagcccaaccgctgtacaccctggcaggatgg
gtgcaacaacagcaacaaggccaacaagaaccagaagaacaaccacaaccgccatcgcca
ctgccaggtggacagcagcagcagcagcagcagcagcagcaacaggctccccgctctgag
gagaagctgctgcaggcggaggcgggcactggcgcaaattgggacacggcagtgggaagc
agcggcggcggtggttcgggctggcgcacggcttttggcggccaacgtcaaccgcacatt
cgtagacgtgtggggtttcgtacagtggagctcgtgacggtgccgctggatgacgtcatg
gcagagttggtcgacttaggatccggcaccgaaaccaaaggcgggacgactggaactggg
tcagtcaacacatcgggccccccgggccgcccccccggctccgcgacatcttcattcccg
caagctccaaatgagacgtttttcctgcgggtcaacggccaaccgttattcgctcgaggt
gccaacgtgataccgctccacatattacacacaatgacacccaccatcgcaagaagcagc
gccaacagcagcagcagcagcgccaacggcacagacccatgggacgttgggagggcgaag
aaggagcagcaggaggggatagctgggctgctggcggcggcactggggtcgggaatgaac
atgttgcgagtgtggggtggcgggcgttaccaattggacgagctgtacgacatggctgac
ggcgcgggtttgctgatatggcaggagtttatgttcgcgtgcaacccctatcccaacacg
ctggacatgaatgcagaggtacagcatgaggctgcggagcaagtacggcgtctggccggg
cacccgtcaattgcaatttggggcgggaacaacgaggttgagacaagcttcgactggttt
gacgagacacgggccaacaggccgctctacgtcgcggactttgtggcgcaattcgtggag
cttttagggggtgtactgcagcagttggaccccggtcgaccttacgtggacagctctccc
tcctcggggctgtactcccggctgccgtacatcaagcgctggggcaacgctggggatcaa
gccgccggtgatgtgcactactacaactataaggacgactgcttggatccaggcatctat
cccatggcccgcttcgtgtctgagtacggctaccagagcttcgcgtcgtacgaggtgata
cggcagtacggtgagccgtcggactttatgcctctgtccgagttcatgagacacaggcag
cgccaccccaacggggaggccgagctcattgcctcgctgacgtcacacttccgtcagccg
cccggggggtgggcacccgggggcggcggcggcggcgtgtcctctgccgcggctgcagtg
gcggcggcggcggcgatggccagggcggcgagggcggccagggcagcgatggtaggcaag
cagctgcaacagcaacagcaacagcagcagcaacagcagcagcagcagcaacagcagcag
caacagcaggatgaggcgaacaacacaaaggtcgatccattgcacctgtacaaggcatgg
atatatcaattgcagactcagcaagcgctgtgttactcaaccgcaatcggccgctggcgt
tcacttcgctccgacccacgggtcatgtccatgggagtgctgtactggcaactcaatgac
atctggcccggatacagctggtcctccctggactacggcggcagttggaaaccgttgcac
tcgattgtacggcggacgtttgcgcctgtgacgattgtggcgtcgtattataagcgtcgg
agcggaaatgtcacggcgtacgtcatcaacgacggaccgcaagaggttgccgtacagctc
atcgtgacggttatctccctggcgccatgccctgctgtcgctggcggcggcggcggcgtt
gccgccaataccagccgtactaccgggggcggcggcggcggcggcagtgtctcgggcagc
ggtggtggctgcagcggcgacgcggcgggggaggcgcgg
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integrated database retrieval system