Volvox carteri f. nagariensis: VOLCADRAFT_119100
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Entry
VOLCADRAFT_119100 CDS
T01330
Symbol
smc1
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_119100 (smc1)
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
VOLCADRAFT_119100 (smc1)
Meiosis-specific proteins
Cohesin complex and associated proteins
VOLCADRAFT_119100 (smc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_29
AAA_21
AAA_23
kleA_kleC
WWC1
CT398_CC
Synaptobrevin
ABC_tran
Motif
Other DBs
NCBI-GeneID:
9617376
NCBI-ProteinID:
XP_002955572
JGI:
119100
UniProt:
D8UA74
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MAENDYHASQGYIKRLEVENFKSYKGHHRIGPFVSFTAVIGPNGSGKSNLMDAISFVLGV
KTTQLRGSLKELLYSDGGATTNPQPRRGFVKLVYALQERSDGDQRLSERELSFARVILPT
SSDQDATFKSEYRVDDQIVTWDAYCKKLATLGILVKVRNFLVFQGDIEAVAAKSPQGLTT
LFEQISGSEALRARFDELLGARSQAEEKVSLLFAKRKQILAELKAKKREKEDAEKHAKAL
EELRGLKSDMAVWQLAVEGRSLLEAVDDQRQAEEALAALQVETNRRAAAGFKKEIALLEK
KLKKVQQDRDKKSPALLKAKEELSRLVRNIRIGQKALTDKDKQVADQERKIKKLEADLKQ
VQVGTETTRQAGERKTLEAEQETDREQLSQLQTQIEQLRNRAAQLRSQAEEVRVRSEASQ
AELAEANAARQRLQLDQERLERALENIRMDRNQSRRDREISEMAERLKQRFPGTVYGKLV
TLAKPIQSRYQLALSVAMQRDLDSVVVNNEATASQCIQILRDEKKPTMNFLPLDFLKVKP
VNERLRQLGPGAKLAIDLLDIPDRRMERAFQFALGDTVICEDEDHARDLAFGGQRLKVVT
LQGTLIAKRGTMTGGSAPPEARGARWDEGELTRLRRELEEVLASLERLPTSRSLTEAEQV
LAGEMGALNSKIKYAEADAKESGSRAAGLLAQAERAEAEADRKAPEVQQLQTRMEARAGK
IQRLTDAINRVTDRVMADFSRRVGVSSIRDWEERHASFEASVQERRRELTQRRTHTESQL
EYERSLLAKLRTAAKDAAEELSEHSARQAVLEKEAAAAQAATADVEVEVKALTDKMDDLR
NKVAAEEERIAELQRSASDLVRRTAELRRGASRAGLAVEDRATRMLDVVNSARLEQVKLP
RKRRTTESEDDEEDEDEEMADQEAGATARGGGAFIDLDALVAGIGGGEDGGETATAEGSA
GGGSGAGGSSGEGPPSTRALASAMSELVRQLDTSRLSRQQLAAETARERERVVSELRDRI
TALQSELDKAAPNMRAVEQYGAVKEREREQLAALHAAQAEATSAAEEFNRVRTQRQDLFS
AAFKHISEQISSIYKDLTRSSTHPLGGQAYLHLENEEEPYAGGIKYTAIPPAKRFRDMEQ
LSGEFLREGGSAGRRVPGLGEGLQQDPHL
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaacgattatcatgcgagccaaggttatatcaagcggcttgaggtggaaaat
ttcaaatcctacaagggtcaccaccggataggccccttcgtgtccttcaccgccgtgatt
gggcccaacggcagcggcaagtcaaacctgatggatgccatcagctttgtcctaggcgtc
aagacaacgcagctgcgcggctccttgaaggagctgctctacagcgacggcggtgcaacg
accaacccacagccgcgaaggggctttgtaaagctggtctatgctctccaggaacgcagc
gacggtgatcaacggctttcagaacgagagctgagcttcgcccgggtcatcctgccaacc
agctccgaccaggacgcgaccttcaaaagtgaatatcgagttgacgaccagatcgtcaca
tgggacgcctattgcaagaagctggccacgttgggcattctggtcaaggtccgaaacttc
ctggtgttccagggtgatatcgaggcggtggccgccaaaagccctcaaggcctcaccacc
ctgttcgagcaaatcagcggcagtgaggcgctgagggctcgcttcgatgagctgctcgga
gctaggtcccaggccgaggagaaggtgagtctgctgttcgcgaagcgcaagcagattctt
gccgagctgaaggcaaagaagagggagaaggaggatgcggagaagcacgccaaggcactg
gaggagctgcgcggtctcaagtccgatatggctgtctggcagctggctgtggagggtcgt
agtctgttggaggccgtggacgaccagcgccaggcggaggaggcgctggcagcactgcag
gtagaaaccaaccgtcgagctgccgccggtttcaagaaggagattgcgctgttggagaag
aagctgaagaaggtgcaacaggaccgggacaagaagagccccgccctgctgaaggccaag
gaggagctgtcccgcctggttcgcaacatccgaatcggtcagaaggccctgactgacaag
gacaagcaggtggcggaccaggagcgcaagatcaagaagctggaggcggacctgaagcag
gtccaggtggggaccgagaccacccgtcaggccggtgagcggaaaaccctggaggcggag
caggagaccgacagagagcagctctcccagctgcagacccagatcgagcagctccgaaac
cgtgccgcccagttgcggtcccaggcggaggaggtccgggtccgcagtgaggccagtcag
gcggagctagcggaggccaatgccgcccgtcagcggctccaactcgaccaggagcgcctg
gaacgggctctggagaacatacggatggaccgcaaccagagccggagggatcgggaaata
tcggagatggcggagagactcaaacagcgctttccgggcaccgtgtacggcaagttggtt
accctggctaagcccattcagagtcgttatcagttggccttgtcggtggcgatgcagagg
gacctggacagtgtggtggttaacaatgaggcaaccgcctcgcagtgcatccagatcctc
cgtgacgagaagaagcccaccatgaatttcctgccattagacttcctaaaagtgaaaccc
gtgaatgagcggttacggcagttgggtcccggagccaagttggccattgatctgttggac
atacccgaccgccgcatggagcgggcttttcagttcgcattgggcgacacggtcatctgt
gaggatgaggaccacgcccgggatctggcgttcggaggtcagcggctcaaggtggtgacc
ctgcagggcaccctcatcgccaagaggggaactatgacaggcggcagtgctccccccgag
gctcgaggtgctcgctgggacgagggcgagctgactcgcctccgcagggagctggaggag
gtgctggcctccctggagcgactgcccacctcccgcagcctgacggaggcggagcaggtg
ctggcgggggagatgggggcgctgaacagcaagatcaagtacgcggaggcagatgccaag
gagtccggcagccgggccgcgggtctgctggcccaggctgagcgagccgaggcggaggcg
gaccgtaaggcccccgaggtacagcagctgcagacgcggatggaggcgcgggcagggaag
attcagcggctgactgacgccatcaaccgcgtgaccgaccgcgtcatggcggacttctcc
cgtcgggtgggggtcagctccatccgggactgggaggagcggcatgccagctttgaggcc
agtgtgcaggaacggagaagggaactcacacagaggcgcacacacacggagtctcagctc
gagtacgagcggtcgctgctggccaagctgcggaccgccgccaaggacgcggcggaggag
ctgtcggagcactcggcccgtcaggcggtgctggagaaggaggcggcggcggcgcaggct
gcgacggcggatgtggaggtggaggtgaaggccctgacggacaagatggacgatctcagg
aacaaggtggcggcggaggaggagcgtattgccgagttgcagcggtccgcctccgacctt
gtacggcgcactgcggagctgcggcgcggagccagtcgcgcggggctggcggtggaggac
agagccaccagaatgctggacgtggtgaattcggcacgactcgaacaggtcaagctgccc
cgtaaacgtcgaacgaccgaatcggaggacgacgaggaggatgaagacgaggagatggcg
gaccaggaggcgggagctaccgcccggggcggtggcgcgtttattgacctggatgcgctc
gtagcgggcatcggcggcggcgaggatgggggcgagaccgccacggcggagggctcagct
ggcggcggcagcggcgccggcggcagcagcggcgaaggccctccctcgactcgtgctctg
gcatccgccatgtcggagcttgtacggcagctggacacgtcccgtcttagcaggcagcaa
ttggccgccgaaaccgcccgtgagcgcgagcgtgtggtttcggagctccgagaccgcatc
accgcactgcagtctgagctggacaaggcggctcccaacatgcgggcggtggagcagtac
ggcgctgtcaaggagcgcgagagggaacagctggccgccctccacgcggctcaggcggag
gccaccagcgccgcggaggagttcaaccgggttcgaacacagagacaggacctcttcagt
gcggccttcaaacacatctcggagcagatcagctccatctacaaggacctcactcgcagc
tccacccacccgctggggggtcaggcgtacctgcacctggagaacgaggaggagccgtac
gcggggggaatcaagtacacggccattccccccgccaagcgcttcagggacatggagcag
ctcagcggagaatttctacgagaaggcggatctgctggtcggcgtgtgccgggactcgga
gaggggctgcagcaagaccctcacctttga
DBGET
integrated database retrieval system
