Volvox carteri f. nagariensis: VOLCADRAFT_119430
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Entry
VOLCADRAFT_119430 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_119430
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_119430
Spliceosome [BR:
vcn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
VOLCADRAFT_119430
DNA repair and recombination proteins [BR:
vcn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
VOLCADRAFT_119430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_33
nSTAND3
AAA_16
AAA_22
KTI12
Motif
Other DBs
NCBI-GeneID:
9619820
NCBI-ProteinID:
XP_002956601
JGI:
119430
UniProt:
D8UD46
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MTTDGAATPFLYSVSLNPLDCNLDTILSSDRLSAHTLSEAGCGYCWSGVRANLGIFARGK
FFFRVTVGAPRPVNVHNTAALSTAYGIRVGVSRFQTAVEQLGEVPYSWAYCSTGSRASFP
GAPTNGSGGDGGGDGGGGYPVFEEAVGPRVVPGDTITLALDLATAPAPGGRQAAAAANTA
DPAPSAVAEAAAAADANAGEGPQGSLWVAVNGGKLVRLFSLPLPNQPMQAYFPHILLRNL
SATADFVGTQSPEPQGTKELQRQRQQQPQPQRHHELPAGLLERGFRPWQEATIVTADCVS
TMPPPGQLPPASKCEVLVLTGLPGSGKTTWAARHCAAHPARRYCVLGTQLVLEQMRLSCP
RTRRFHYMGKPEEVFALVADTLTRIQARAPATPRNYILDRTHVTSKSRRNAVVPFRAAGF
RCASVAVVSTEDKLLAQQKEAFEREGKVVPDEAMAVLRADFTLPNLEEGFDDVQYPLLGV
IAALTTVNRQRREARTWLEWRLKVGAKVAGLPGPPPPLPEQQQQQQHVQRQQGEEGQRLQ
GLQQQQQEMPQRQLDSSGTAEGSGDGTAAVSPIGGTAPVLPSQEAATAAAPAHRTSESGS
AAGTVASGLVHNGGGSGGRRGRGEVNRGETMEVSPPPPLPAGPVFPQPPPPLPEEQQLNN
ADGIEAQASLRGSSPTLPPPPDESPLVPPLPQKQPQMQQWQPQPPSQQHQQFCGAQHQVP
ATHMQPSTQVSQQHPLVSWDGELWPPRHWQVPQPQQQARGQGMQQQHLLQQSLPAGQLHH
PPPSLTSSNSAPLTPQAAPSLPMAPLLVPHQRFQPQQPFPQLGLAPWQPLPQHCGNGGSG
AFMPPQHQPQFQPPQLQPTFFGQL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgatggtgcggcgacgcccttcctatacagcgtctcgctcaatcctttggac
tgcaacttggacacgattctgagcagcgatcgcctgtccgcacacacgctttcggaggct
ggttgcggctactgctggtctggagtgcgggcaaacctcggcatcttcgcgagaggcaaa
ttcttcttcagggtcacagtcggagccccccggccggtcaacgtacacaacacggcagcg
ctgtccacagcgtacggcatccgagtgggcgtttcgcgcttccagacagccgtggagcag
ctgggcgaggtgccctactcctgggcctattgcagcaccggcagcagggcctctttccca
ggagctcccaccaacggcagcggtggcgatggcggcggtgatggcggcggcgggtacccg
gtcttcgaggaggccgtcggtccgcgagttgttccaggagatacgattaccctcgcgctc
gacctggcgacggcgccggctccagggggcaggcaggcagcagcggcggcgaatactgcg
gatccagcgccgtcggcggtggcggaggcggcggccgcagctgacgcaaacgccggtgaa
gggccccagggtagcttgtgggtggcggtcaacggtgggaagctggtgcggctgttctct
ctgccgctgcccaaccaacccatgcaggcgtactttccgcacatcctgctccggaacctg
tccgcgacagcggatttcgtgggcacgcagagtccggagccgcagggaaccaaggaattg
caacgacagcggcagcagcagccgcaaccccagcggcatcacgaactgccggcggggctg
ctggagcgaggcttccggccgtggcaggaggccaccattgtgaccgccgactgcgtcagc
accatgccgccgcccggacagctgccacctgcctccaagtgcgaggtgctggtgctcacc
ggcctccccggcagcggcaagaccacctgggcagcccggcattgcgccgcacaccctgct
cggaggtactgcgtgttggggacacagctggtgctagagcagatgaggctatcctgtccc
cgcactcgccgtttccactacatgggtaaacccgaggaggtgttcgctttggtggccgac
acactgacacgcatccaggcgcgagcgccagcaacacccagaaactacatccttgacaga
acacatgtgacgagcaagtcgcggcgcaatgcagtggtgccctttcgcgccgcgggcttc
cgttgcgcgagtgtggcggtcgtgtcaaccgaggacaaactgctcgcgcagcagaaggag
gcgttcgagcgcgagggcaaggtggtgcctgatgaggccatggcagtgttgcgagcggac
tttaccttgcctaatttggaggagggcttcgacgacgtgcagtacccgcttctgggcgtc
atcgcagcgctcacaacggtcaatcggcagcgtcgggaggcgcggacatggctggagtgg
agacttaaagtaggggccaaggttgccggcctcccggggcctcccccaccgttgccggag
cagcagcagcaacagcagcatgtgcagcggcagcaaggggaggaaggccaaaggcttcaa
gggctgcagcaacagcagcaggagatgccacagcgccagctagatagcagcggcaccgca
gaaggttctggcgacggcacagccgccgtgtcgcccattggtggaacggcgccagtgcta
ccatcacaggaagcggcgacggcggcggccccagcccaccgaacgtcggaatctggttcc
gcggctggcaccgtcgcatcagggttagtccacaacggcggtggcagcgggggacgacgc
ggtagaggtgaagtcaataggggcgagaccatggaagtgtcgccaccgccaccgcttccg
gccgggccagtgttcccacaaccaccgccgcctctgcctgaggagcagcagctcaacaat
gctgacggcatcgaggcacaagcttcactgcggggttcatctcccacactgcctccgcct
cctgatgaatcgccactggtgccgccgctgccccaaaagcagccacagatgcaacaatgg
caaccacaaccaccatcacaacagcatcagcagttttgtggggcccagcaccaggtaccg
gcgacacacatgcagccatccacacaggtctcccagcagcacccgcttgtgtcatgggac
ggcgagctgtggccgccgcggcactggcaggtgccccaaccacagcaacaggcccgagga
cagggtatgcagcagcagcacctgttgcaacagtcgctgccggcggggcaactgcaccat
ccgccgccttcactgacatcttcaaactctgcaccactgacgcctcaggcggcgccgtcg
cttccgatggcccccttgctcgtgcctcatcagcgtttccaaccgcagcagcccttcccg
cagctgggcctggccccttggcagcccctcccccagcactgcggcaacggcggcagtggc
gccttcatgccgcctcagcatcagccgcagtttcaaccaccacagctgcaacccacgttt
tttggtcaattg
DBGET
integrated database retrieval system