KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_119430
Entry
VOLCADRAFT_119430 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K15047  heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
vcn  Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vcn03041]
    VOLCADRAFT_119430
   03400 DNA repair and recombination proteins [BR:vcn03400]
    VOLCADRAFT_119430
Spliceosome [BR:vcn03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    VOLCADRAFT_119430
DNA repair and recombination proteins [BR:vcn03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     VOLCADRAFT_119430
SSDB
Motif
Pfam: AAA_33 nSTAND3 AAA_16 AAA_22 KTI12
Other DBs
NCBI-GeneID: 9619820
NCBI-ProteinID: XP_002956601
JGI: 119430
UniProt: D8UD46
LinkDB
Position
Unknown
AA seq 864 aa
MTTDGAATPFLYSVSLNPLDCNLDTILSSDRLSAHTLSEAGCGYCWSGVRANLGIFARGK
FFFRVTVGAPRPVNVHNTAALSTAYGIRVGVSRFQTAVEQLGEVPYSWAYCSTGSRASFP
GAPTNGSGGDGGGDGGGGYPVFEEAVGPRVVPGDTITLALDLATAPAPGGRQAAAAANTA
DPAPSAVAEAAAAADANAGEGPQGSLWVAVNGGKLVRLFSLPLPNQPMQAYFPHILLRNL
SATADFVGTQSPEPQGTKELQRQRQQQPQPQRHHELPAGLLERGFRPWQEATIVTADCVS
TMPPPGQLPPASKCEVLVLTGLPGSGKTTWAARHCAAHPARRYCVLGTQLVLEQMRLSCP
RTRRFHYMGKPEEVFALVADTLTRIQARAPATPRNYILDRTHVTSKSRRNAVVPFRAAGF
RCASVAVVSTEDKLLAQQKEAFEREGKVVPDEAMAVLRADFTLPNLEEGFDDVQYPLLGV
IAALTTVNRQRREARTWLEWRLKVGAKVAGLPGPPPPLPEQQQQQQHVQRQQGEEGQRLQ
GLQQQQQEMPQRQLDSSGTAEGSGDGTAAVSPIGGTAPVLPSQEAATAAAPAHRTSESGS
AAGTVASGLVHNGGGSGGRRGRGEVNRGETMEVSPPPPLPAGPVFPQPPPPLPEEQQLNN
ADGIEAQASLRGSSPTLPPPPDESPLVPPLPQKQPQMQQWQPQPPSQQHQQFCGAQHQVP
ATHMQPSTQVSQQHPLVSWDGELWPPRHWQVPQPQQQARGQGMQQQHLLQQSLPAGQLHH
PPPSLTSSNSAPLTPQAAPSLPMAPLLVPHQRFQPQQPFPQLGLAPWQPLPQHCGNGGSG
AFMPPQHQPQFQPPQLQPTFFGQL
NT seq 2592 nt   +upstreamnt  +downstreamnt
atgaccaccgatggtgcggcgacgcccttcctatacagcgtctcgctcaatcctttggac
tgcaacttggacacgattctgagcagcgatcgcctgtccgcacacacgctttcggaggct
ggttgcggctactgctggtctggagtgcgggcaaacctcggcatcttcgcgagaggcaaa
ttcttcttcagggtcacagtcggagccccccggccggtcaacgtacacaacacggcagcg
ctgtccacagcgtacggcatccgagtgggcgtttcgcgcttccagacagccgtggagcag
ctgggcgaggtgccctactcctgggcctattgcagcaccggcagcagggcctctttccca
ggagctcccaccaacggcagcggtggcgatggcggcggtgatggcggcggcgggtacccg
gtcttcgaggaggccgtcggtccgcgagttgttccaggagatacgattaccctcgcgctc
gacctggcgacggcgccggctccagggggcaggcaggcagcagcggcggcgaatactgcg
gatccagcgccgtcggcggtggcggaggcggcggccgcagctgacgcaaacgccggtgaa
gggccccagggtagcttgtgggtggcggtcaacggtgggaagctggtgcggctgttctct
ctgccgctgcccaaccaacccatgcaggcgtactttccgcacatcctgctccggaacctg
tccgcgacagcggatttcgtgggcacgcagagtccggagccgcagggaaccaaggaattg
caacgacagcggcagcagcagccgcaaccccagcggcatcacgaactgccggcggggctg
ctggagcgaggcttccggccgtggcaggaggccaccattgtgaccgccgactgcgtcagc
accatgccgccgcccggacagctgccacctgcctccaagtgcgaggtgctggtgctcacc
ggcctccccggcagcggcaagaccacctgggcagcccggcattgcgccgcacaccctgct
cggaggtactgcgtgttggggacacagctggtgctagagcagatgaggctatcctgtccc
cgcactcgccgtttccactacatgggtaaacccgaggaggtgttcgctttggtggccgac
acactgacacgcatccaggcgcgagcgccagcaacacccagaaactacatccttgacaga
acacatgtgacgagcaagtcgcggcgcaatgcagtggtgccctttcgcgccgcgggcttc
cgttgcgcgagtgtggcggtcgtgtcaaccgaggacaaactgctcgcgcagcagaaggag
gcgttcgagcgcgagggcaaggtggtgcctgatgaggccatggcagtgttgcgagcggac
tttaccttgcctaatttggaggagggcttcgacgacgtgcagtacccgcttctgggcgtc
atcgcagcgctcacaacggtcaatcggcagcgtcgggaggcgcggacatggctggagtgg
agacttaaagtaggggccaaggttgccggcctcccggggcctcccccaccgttgccggag
cagcagcagcaacagcagcatgtgcagcggcagcaaggggaggaaggccaaaggcttcaa
gggctgcagcaacagcagcaggagatgccacagcgccagctagatagcagcggcaccgca
gaaggttctggcgacggcacagccgccgtgtcgcccattggtggaacggcgccagtgcta
ccatcacaggaagcggcgacggcggcggccccagcccaccgaacgtcggaatctggttcc
gcggctggcaccgtcgcatcagggttagtccacaacggcggtggcagcgggggacgacgc
ggtagaggtgaagtcaataggggcgagaccatggaagtgtcgccaccgccaccgcttccg
gccgggccagtgttcccacaaccaccgccgcctctgcctgaggagcagcagctcaacaat
gctgacggcatcgaggcacaagcttcactgcggggttcatctcccacactgcctccgcct
cctgatgaatcgccactggtgccgccgctgccccaaaagcagccacagatgcaacaatgg
caaccacaaccaccatcacaacagcatcagcagttttgtggggcccagcaccaggtaccg
gcgacacacatgcagccatccacacaggtctcccagcagcacccgcttgtgtcatgggac
ggcgagctgtggccgccgcggcactggcaggtgccccaaccacagcaacaggcccgagga
cagggtatgcagcagcagcacctgttgcaacagtcgctgccggcggggcaactgcaccat
ccgccgccttcactgacatcttcaaactctgcaccactgacgcctcaggcggcgccgtcg
cttccgatggcccccttgctcgtgcctcatcagcgtttccaaccgcagcagcccttcccg
cagctgggcctggccccttggcagcccctcccccagcactgcggcaacggcggcagtggc
gccttcatgccgcctcagcatcagccgcagtttcaaccaccacagctgcaacccacgttt
tttggtcaattg

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