Volvox carteri f. nagariensis: VOLCADRAFT_120016
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Entry
VOLCADRAFT_120016 CDS
T01330
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase mitochondrial precursor
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcn03016
]
VOLCADRAFT_120016 (pus1)
Enzymes [BR:
vcn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
VOLCADRAFT_120016 (pus1)
Transfer RNA biogenesis [BR:
vcn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VOLCADRAFT_120016 (pus1)
Prokaryotic type
VOLCADRAFT_120016 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
9628129
NCBI-ProteinID:
XP_002958657
JGI:
120016
UniProt:
D8UJ24
LinkDB
All DBs
Position
Unknown
AA seq
188 aa
AA seq
DB search
MIRSDLTARTAWCQVVAYDGCEFAGFQFQAGKVRTVQGELERGAKRLFHGCSRMVGASRT
DGGAHAYGQVVHFDVYGTRDSLESDALYYNSFLPPDVRVLGLSYAEDGFDSHFSSCGKTY
LYKFAAGLPDPLQSKYRWWVYDRWCERSRGKPGKLSDVELDVGLMQQAADMLLGRHDFSA
FMDNKRPA
NT seq
565 nt
NT seq
+upstream
nt +downstream
nt
atgattagatctgatctcacagcaagaaccgcatggtgccaggttgtggcgtacgacggg
tgcgaatttgctggattccagttccaggcagggaaagtgcgaacggtgcagggagagttg
gagcgcggtgccaagcggctgttccacggctgtagtcgaatggtgggcgcatctcgtacg
gatggcggcgcgcacgcgtacggccaggtggtccattttgacgtgtacggcacccgcgac
agcctcgagtctgacgcgttgtactacaactccttcctgccgccggatgtacgggtgctc
ggcctgtcgtacgcagaggacggcttcgacagccactttagcagctgcggaaagacgtac
ttgtataagttcgctgcgggactgccggaccccttacagtccaagtaccgctggtgggtg
tacgataggtggtgcgagcgcagccgtggcaaacccgggaaactgtctgacgtggaactg
gacgtggggcttatgcagcaggcggcggacatgctgctgggacgccatgacttcagcgcc
ttcatggacaacaagcgacccgcgg
DBGET
integrated database retrieval system
