Volvox carteri f. nagariensis: VOLCADRAFT_120224
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Entry
VOLCADRAFT_120224 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcn03009
]
VOLCADRAFT_120224
Enzymes [BR:
vcn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
VOLCADRAFT_120224
Ribosome biogenesis [BR:
vcn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
VOLCADRAFT_120224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
9625478
NCBI-ProteinID:
XP_002945867
JGI:
120224
UniProt:
D8TIB5
LinkDB
All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MDDEFGGGRSDDGGSEGQDDEGEDSEDDDDDDDHDPLQGKEFVDDGDSDDDDDEGEGGED
AEDDDEDDDMDGPGGPDSGDMGDLLGEDEEEDEGEGESEDDDDDDDDDDDDDDDEEMTEA
EKQSLALDKFRRKQATLAAREARDMAAEADIDTNMEEGATFTLPSGQQVDVVEAEKLAPP
DLALVARRMKATVAVLETFSSRREPGRSRADYLAQLKRDLGTYYGYNDFMIDMYLNMFSV
AEALELMEANEVPRPITLRTNTLRTRRRELAAALIQRGVSLDPIGPWSKVGLVVYESKVP
IGATPEYMAGHYMLQGASSFMPVMALAPQPEETVVDMAAAPGGKTTYIAALMRNTGTIFA
NEISKDRLKSITGNLTRLGVTNTIVCNYDGRELPGVLGERSVDRVLLDAPCSGTGVVSKD
PTVKTSKSQQDIWRCGHLQKELLLAAIDMVDANSPTGGYIVYSTCSVCVEEDEVIINYAL
RKRNVKVVPTGLEFGREGFVRYRDFRFHPSLKHARRFYPHAHNLDGFFVCKLKKLSNEPK
KATGDGDEEEENEEEEAAVADGAADNDDPDVASGRKGGKKGGQQEPKPVIIPVSRPKLHP
KGAQRTPSKKVLDEQPAEDDPDMAANMAQLKEALAKKATKAKGDGANGAAPAKAKSAKEG
KGGGKARGADVAADDESEGAQQEEKERLAVGVSARAGTSGRGQVLQEKQRAKAAQQTAAA
EDGGKAGGLTQAAGGVEKGKTGSGKALPVGGTHATTAAPKSTTEANGRVPTSAKKQQQEG
KPAERQQQRRQQQQERVKADGGTKRPSTPADGKAKAGSRAAHMPKKQRK
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaatttggtggcggccgcagcgatgacggaggcagcgaagggcaggacgac
gagggcgaggacagcgaggacgacgatgatgatgatgatcatgatccgctccagggaaag
gaattcgtggacgacggcgacagcgacgatgatgacgacgagggggaggggggtgaagac
gcggaagatgatgacgaggatgatgatatggacgggccaggcggacctgactcgggcgac
atgggggatctgctgggtgaggacgaggaggaggatgaaggggaaggcgagtcggaggac
gacgacgacgacgacgacgatgatgatgatgatgatgatgatgaagagatgacggaggcg
gagaagcagtccctggcgctagacaagtttaggcgcaagcaggctacgctggctgctcgg
gaggctcgtgacatggcagctgaggcggacatcgacaccaacatggaggagggcgccacg
ttcacattgcccagtgggcagcaggtagacgtggtggaggctgagaagcttgcgcccccc
gacctggctctggtggctcgccgcatgaaggccaccgtggcagtgctggagactttcagc
tcccggcgggagccgggtcgcagtcgggcggactacctagcgcaactgaagcgggatctg
ggcacctactacgggtataacgacttcatgattgacatgtacctcaatatgttcagtgtg
gccgaggctctggagctgatggaggccaatgaggtgccccgacccatcaccctccgcacc
aacaccctcagaacccggaggagggagctggcggccgccctcatccagaggggggtgtca
ctggaccccatagggccctggtctaaggtggggctggtggtgtacgagtccaaggtgccc
attggcgccacgcccgagtacatggcgggtcattacatgctgcagggcgcctcctccttc
atgcccgtcatggctctggccccccagccggaggagaccgtcgtggacatggcagctgct
cccggtggcaaaaccacctatatcgccgccctcatgcgcaatacgggcaccatcttcgcc
aatgagatctccaaggaccgcctcaagtccatcaccggcaacctgacgcgcctgggcgtc
accaacaccattgtctgcaactacgacggccgagagctgcccggggtgttgggggagagg
tcggtggaccgggtgctgctggatgcgccttgctcggggactggggtggtgtccaaggac
ccgacggtcaagacctccaagtcccagcaggacatttggcggtgcggccacctccagaag
gagctgctgctggcagccattgacatggtggacgccaacagccccaccggcggctacatt
gtctactcgacctgctctgtgtgtgttgaggaagacgaggtcatcatcaactatgcgcta
cgcaaacggaacgtcaaggtagtgcccacgggcctggagtttgggcgcgaagggttcgtt
cgctatcgggacttccgcttccacccctcgctcaagcacgccaggcgcttctatccacac
gcgcataacctggacggcttcttcgtctgcaagcttaagaagctttccaacgaacccaag
aaggcaactggggatggggacgaggaagaggaaaatgaggaggaggaggcggcagtggcc
gacggggcagccgataacgacgaccccgacgtggcgtcaggcagaaagggtggcaagaag
ggcggtcagcaagagcctaagcccgtgatcatccccgtcagcaggcctaagttgcacccc
aagggtgctcagcgtacgccgtccaagaaggttctggacgagcagccggccgaggatgac
cccgacatggcagcaaacatggcacagcttaaggaggcccttgccaagaaggcgactaag
gccaagggcgatggcgcgaatggagcggctccggcaaaggccaaaagtgccaaggaaggg
aagggcggcggcaaggcgaggggggcggacgtggctgccgacgatgagtccgaaggggcc
cagcaggaggagaaggagcggcttgcagtgggagtcagcgcacgcgcggggaccagcggt
cgtggacaggttttgcaggagaagcagcgagccaaggcggcccagcagacagcagctgcg
gaggatggcggtaaggctgggggcctgacgcaggcagcaggaggcgtggagaaagggaaa
acgggaagcggcaaagcgttacctgtgggcggaacacatgcaaccacggccgcacccaag
agcacgaccgaggccaacggccgggtgccaacctcggccaagaagcagcaacaggaaggc
aagccagctgagcggcagcagcagcggaggcagcagcagcaagagcgggtcaaggcagac
ggagggacgaagcggccaagcacaccggctgacgggaaggccaaggcagggagtcgagcc
gcacatatgcccaagaagcagaggaaatga
DBGET
integrated database retrieval system
