KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_120230
Entry
VOLCADRAFT_120230 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K10841  DNA excision repair protein ERCC-6
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    VOLCADRAFT_120230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vcn03036]
    VOLCADRAFT_120230
   03400 DNA repair and recombination proteins [BR:vcn03400]
    VOLCADRAFT_120230
Chromosome and associated proteins [BR:vcn03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    VOLCADRAFT_120230
DNA repair and recombination proteins [BR:vcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Other TCR factor
      VOLCADRAFT_120230
SSDB
Motif
Pfam: SNF2-rel_dom Ribosomal_S3_C Helicase_C KH_2 WHD_Rad26_CSB ResIII HDA2-3 WHD_SOWAH AAA_34
Other DBs
NCBI-GeneID: 9625500
NCBI-ProteinID: XP_002946233
JGI: 120230
UniProt: D8TIE9
LinkDB
Position
Unknown
AA seq 1596 aa
MSPHGQQHQQQEGHQRPGLTLVETEKDRRIRLGLLTPFDRLAGFERKHRAAGFGSLRHLG
RPELRPEEAAALTRSGRPVGQVIAEAGRVALEARTSRRMAQFLEPEQLPQQERDVRRVPQ
HFWRQAASSHSAGGTSRLRRKSTLPRANTAEARAAARAARRAERRTVAAAAAAIGGSVAG
GDGSEGAGDGGGSDGIRRRENERRKGGRRREEEVGGEDEEGEREGEGQRRRRRRTTRSGQ
AAGGGEAGVHPGVAGGGGGGSGGDAEASASVTSSAESAGEGEDHSNFSDELADGGSSGSE
SYGGTSCSAAAADDDDEGDSEVGAAGDRGDPSSYDDSLYDDADEDFYQERLRRSRAAAAA
ASAGGGGGHGAMHSSAAAAAASGPPRQRRRRQRQRQTAGYAHLRNGDPDERQHEQHLGEG
PKVPAEEEEEEEEEEDVVFEGGFRVPSRLYGRLFDYQQTAVKWLWELHTQRAGGILGDEM
GLGKTVQVIAYLAGLHHSGLYRPSLIVCPATVLRQWMRELRSWWPPFRVVLLHESGRSPP
AAATAVRPDRPALLEVALSSPSGLVLTTYDNLRLQRDLLLRVRWGVAVLDEGHKIRNPDS
EITLVCKQLHTVHRLIMSGSPIQNRLSELWSLFDFIFPGKLGTLPVFQAQFAVPIQVGGY
SNASSLQVTTAYKCAVVLRDLTAPYLLRRRKADVAAQLPAKMEQVLFCTLVSEQLELYRA
YLASTEVGEILEGSRRALCGIDILRKICNHPDLLERVTAQDAEDYGNPARSGKLRVAERV
LTSWHTARQKALLFCQTQQMLDILEKLVAGRGWSYHRMDGGTPVAVRPRLIDDFNTNPDV
FVFLLTTKVGGLGVNLTGATRVMLYDPDWNPSTDIQARERAWRIGQSHSVTIYRLITAGT
IEEKIYHRQIYKSFLTNKVLRDPRQKRFFTARDISELFVLGPEYRKGASAAAAAAAGGDG
GGGTGSLVDTETARIFGATLDMQDALRGGGSGGGGGSGKNRKGLSSTAAAAAALRRRGER
DGEDGDGSGGGAATTAAPSGPGPGLSSRCPHQGPDGGSAQRAGWGRSSAAGQSAAAAAGG
GAYDAGDEDEVHDGGGGAEADESRVLRELLDGGAGIRGLVDHSKIEGANDPEVIAVHAEA
QRVAQRAAEALRRSRLACAAASIATPTWTGRHGRAGAPQLATAAAAPSPPWGGGTCRTQP
AQAQPRQQQQQQQQQQRGVESSAALLAQIRSRQQDIRSAAAAASRGADATAGASTSTSGR
SHGGGDCSSAGGTAAERLAGELVSFLEEHGGLVGSEELVEAFRSRVVSEQMPLFKQVLRQ
VAGLRRRAGGGEWVLKPAFATARVPAGLGGGEVASGVAQAQNLLAKMAVQISKKRKFVAD
GVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQ
KRFNFPADSVELYAEKVLDRGLCAVAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGC
EVIVSGKLRAARAKSMKFKDGYMVSSGNPAKVYIDAAVRHVLLRQGVLGIKVKIMKDWDP
TGKRGPRTPLPDVVKVLEPKEEEIFQEKPHIGKEDM
NT seq 4791 nt   +upstreamnt  +downstreamnt
atgagtccacatggccagcaacaccagcagcaagaggggcaccagcggcccggtctaacg
cttgtggagaccgagaaggaccgccgcatccgcctgggcctcctcactcccttcgaccgc
ctggcgggattcgaacgcaagcaccgggctgctgggttcgggtcgctgcggcacctgggc
cgtccggagttgcggccagaggaggcggcggcgctgactcgcagcggcaggcccgtgggg
caggtgattgcggaggcgggccgcgtggcactggaggcacgtaccagtcggcggatggcg
cagtttctggagccggagcagttgccgcagcaggagcgggatgtgcgccgagtgcctcag
cacttttggcgccaggccgcgtcctcccatagcgccggcggtacctccagactcaggcgc
aagagcaccctgccgcgggccaacacggcggaggcacgggctgcggcgcgagcggcgcgg
agggcggaacgccgtactgtggcggcagcggcagcagccatcggcggcagcgtcgccggc
ggcgacggcagcgaaggggctggcgatggtggcggaagcgatgggatccgacgaagggaa
aatgaaagacggaagggggggagaaggagggaggaggaggtgggaggcgaggacgaggag
ggggaacgggagggggaggggcagcggcgacgtaggaggaggacgacgcggtcggggcag
gcggctggcggcggtgaagccggagtccatcctggggtcgccggcggcggtggcggcgga
agcggcggcgatgccgaggcctccgcctccgtcacctcttccgctgagagtgcgggtgag
ggcgaggaccactcgaacttctccgatgagctggctgacggcggctccagcggaagtgaa
tcgtacggcggcaccagctgcagcgccgccgccgccgacgacgacgacgaaggcgacagc
gaagttggagctgccggagaccggggagatccttcctcctatgatgattcactgtacgac
gacgctgacgaggacttttaccaggagcggctgcgccgcagccgcgctgcagcggcggcc
gccagcgcgggcgggggtggcgggcatggcgcgatgcattcttccgccgccgccgccgcc
gcctctggaccgccccgccagcggcggcggcggcagcggcagcggcagactgccggttat
gctcacctacgtaacggtgatccggacgagaggcagcacgagcagcatcttggtgagggc
cccaaggtgcccgcggaagaggaggaggaggaggaggaggaggaggacgtcgtgttcgag
ggcggcttccgtgttccgtcccggctgtacggcagactgttcgactaccagcagaccgcc
gtcaagtggttatgggagctccacacgcagagggcgggcggcatcctaggggacgagatg
gggctgggcaagacggttcaggtgatagcctacctggcaggtctgcaccacagcgggctc
taccggccctccctgatcgtgtgtcccgccaccgtcctccggcagtggatgcgggagctc
cggagctggtggccccccttccgagtggtgctgctgcacgagagcggcaggagcccgccg
gccgctgcgacggcggtgagaccggacagacccgcactgctagaagtggccctgagcagt
ccctccggactcgtactgaccacgtacgacaatctgcggctacagcgggacctgctactg
cgagtacggtggggagtggccgtactggacgagggacacaagatccggaacccggacagc
gaaatcaccctggtgtgcaaacagcttcacacggtccaccggctgatcatgagtggcagc
cccatacaaaaccggctgtcggagctctggtcgctgttcgacttcatattcccgggaaag
ctgggcacgttgcccgtgttccaggcgcagttcgcggtgcccatacaggtgggtggttac
tccaacgccagcagtctgcaggtgaccaccgcgtacaagtgcgctgtggtgctgagggac
ctcacggcgccgtacctgctgaggagacggaaggcggatgtcgcggcgcagctgcccgcc
aagatggaacaggtgctgttttgcacattggtttcggagcaactggagttgtaccgggcg
tacctggccagtaccgaggtgggtgagatcttggagggcagtcggagggccctatgcggt
atcgacatcctccgcaagatctgcaaccacccggacctgttggagcgagtgaccgcacaa
gatgcggaggattacggtaaccccgcccgctctggtaagctccgagtggcggagcgtgtg
ttgacctcctggcacacggcccgtcagaaggcgctgctgttctgtcagactcagcagatg
ttggacatcttggagaagctggtggcgggtcggggctggagctaccaccgcatggacggg
ggcacaccggtggcggtgcggccccggctgattgacgacttcaacaccaaccccgatgtg
ttcgtgttcctgctcacgactaaggtgggcggtctgggtgtcaacctgacaggcgccacc
cgggttatgttgtacgacccggactggaacccctccacggacatacaggcccgcgaacgt
gcctggcgtatcgggcagtcccattccgtgaccatctaccggctcatcacggcaggcacc
atcgaggagaagatctaccaccgccagatttacaagagcttccttacgaacaaggtgctc
cgagacccgcgccagaagcgcttcttcaccgccagggacatctccgagctcttcgtgctg
ggacccgagtacaggaagggcgcctcagcggcggcggcggcggcagcggggggtgatggt
ggcggcggtacgggtagcctggtcgacacggagacagcccgcattttcggagctactctg
gatatgcaggacgcgctgcgaggaggcggcagtggcggtggcggcggcagtggcaaaaat
aggaagggcctgtcgtccacagcggcagcggcggcggcgctgcgccgccgcggcgaacgt
gacggcgaagacggcgacggcagcggcggcggcgccgccaccaccgctgcgcccagtggc
ccaggcccaggtctcagcagtcgctgcccacatcagggccccgatgggggctcagcgcag
cgagccggctggggtaggagcagcgcggctgggcagtccgcggcggcggcggccggtggc
ggagcctacgacgccggtgacgaggacgaggtgcatgacggcggtggcggtgcggaggcg
gacgagtcccgggtcctgcgggaacttctagacggcggcgcgggtatccgcggcctggtg
gaccactccaagatcgagggcgccaatgatcccgaagtcattgccgtacatgcggaggcg
cagcgtgtggcgcagcgggccgcagaggcgttacgtcgctcccgcctcgcctgcgccgcc
gcctccatcgccacgcccacatggacgggacgccacggccgcgcgggggcaccgcagttg
gcgacggccgcggcggcgccgtcgcctccctggggcggcggaacctgccgcactcaaccg
gctcaggcgcagccgcgccagcagcagcagcagcagcagcagcagcagcggggggttgag
tcatccgcagcgctgctggcgcaaatccgtagccgccaacaggacataagaagcgccgcg
gcggcggcaagccgcggcgccgacgccactgcaggcgcgtcgaccagcaccagtggtcgc
agccacggcggtggcgactgctcctccgctggcggaacggcagctgagcgactcgctggc
gagctggtgtcgttcctggaggagcacgggggcctggtgggtagtgaggagctagtggag
gcgtttcggtcacgggtggtttcggagcaaatgccgctgttcaagcaggtgctgcgccag
gtggcaggactgcggcggcgggctggcggcggcgaatgggtgctgaagccagcatttgcc
acggcgcgggtgccggcggggcttggcggcggggaggtagcctctggtgtcgcacaggcg
cagaacctgttggcaaagatggccgtgcaaatcagcaagaagcggaagtttgttgcggat
ggcgtcttctacgccgagctgaatgagctgcttactcgggagctggctgaggatggctac
agcggtgtggaggtccgcgtgactcccatgcgcacggaaatcattatccgtgccactcgc
acgcagaacgtcctgggcgagaagggccgccgcattcgggagctgacatcggtggtgcag
aagcgcttcaacttcccagccgatagcgtggagctttatgctgagaaggttctggatcgt
gggctgtgcgcagttgcgcaggccgagtcgctgcgctacaagctgcttggcggcttggcc
gtccgccgggcgtgctacggcgtgctgcgcttcgtgatggagagcggtgccaagggctgt
gaggttattgtctccggcaagctgcgggccgctcgtgccaagagcatgaagttcaaggac
ggctacatggttagcagcggcaacccagccaaggtttatatcgacgccgctgttcgccac
gttcttctgcgccagggtgtcctgggaattaaggtcaagatcatgaaggactgggacccg
accggaaagcgtggcccgcgcactccgctgcccgatgttgttaaggtgctggagccgaag
gaggaggagatcttccaggagaagccgcacattggcaaggaggacatgtaa

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