Volvox carteri f. nagariensis: VOLCADRAFT_120362
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Entry
VOLCADRAFT_120362 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_120362
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
VOLCADRAFT_120362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
CBM_20
ResIII
AAA_34
HDA2-3
Motif
Other DBs
NCBI-GeneID:
9618089
NCBI-ProteinID:
XP_002946729
JGI:
120362
UniProt:
D8TJV6
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
MFALDRFGFDTRCDAFDVRQVPVEIDVEALQKRLEARAKAMIQLEEQEVASRTKVKFVLK
QKIGLGECWKVVGRCPELGNMLPEVAPYMQWNNGDVWTYEAKIRPGTFQFKAVLRKPDGQ
YLWEDGKERIIEVPFGEPADLEIQITDVKFKRRTFNESTSINMLKEVQPNSYLSRCTTVN
SDKVSAPKSGPENSLLAAASSMRLPNSEDELEDYSSSSSSSSSSLSEDGPSVPRSIPRRR
LVRLDKSRSAANEQPVDDLLKGIASLDLRPAATQRAGRPSAAPNGSAVHAMPGSSPSNVA
PPQAPSEASGDSDTSESDSDKDVAPFYERLVPSLGAKATAAKATSSAPPKPEPGSLVLGE
DQQYVLGAHVAQKLYPHQVQGVKWLWNLFSMQRGGILGDDMGLGKTMQISAFLAGLFGSQ
LVRRAIIIAPKTLLPHWIKELTVCGLRNLTHEFFGNSESERSAALRGVVSGRGVIVTTYG
MVQHNSEQLARPAHSSRDHAFTWDVMLLDEGHKIKNPKMKLVEHLNKLPARVRVIISGTP
IQNNLMEMHSLFDFTTTGLLGDAKTFKKNYERPITKGLDKEATARERQTGAAIAAELRQR
VEPYFLRREKKDVLRNDSSSSSNDVGGRGDATSESGPSSSSGSAAGVAPQVGQRARGLPR
KNDMRKIYTAFLHTDSVRQVLNEKASPLAAITVLKKICDHPALLSQRAANNVIKGAHRWA
KHGGSQRREMDDFIVYSDEDIVDSSDSDDAEGGKHGDGEPPAGWLEDGAGLDTELARELE
QRGAEASCKSAFVLALLGRLHAEGHRTLIFSQSKVMLSILEAGVKAMKLSYCRIDGDVAS
AEERQAHVQRFQNSNIPVFLLTSQVGGLGLTLTAADRVIIVDPAWNPSVDDQSVDRAYRM
GQTRDVVVYRLITCGTVEEKIYRRQVFKGGLSKTGTEEGIQFRYFTQTELRDLFSVTTEG
LQQSVTQSQLHEMHGHQRDASEDVRRHLEQVRRMDSVAGIHDHNLLFTRRPDEHVPSAQE
GRAILNQMTGSGPVGLDALTAKLGSGLKLDSRVEDTKRQAQINELRNEVVKSKNAIANYE
SFISSGKAGAMPDRGAKVRAVLQEVRTKLEAQLAQLAALEGRNVDAATPDAGTGPDTGGT
RTLPAAVLVTAAQGAASGPHLSQPQSERPPGPTLGGRRFGAGLRSRSLGNGDSTKSESAL
QATGQDQPHKQQSAGMPCSSRDPVNGAVK
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctctagacaggttcggtttcgatactcgctgtgacgcctttgatgtgcggcag
gttcctgtcgagatagatgtcgaggcgctccagaagcgtcttgaggcgcgtgcgaaagcc
atgattcagctggaggagcaggaggttgctagccgcacaaaggttaaatttgtgctcaag
cagaaaattgggcttggtgagtgttggaaggttgttggcagatgcccagagctgggcaac
atgttgccagaggttgcaccttacatgcaatggaacaacggtgacgtatggacctacgaa
gcaaaaattcgccccggtacctttcaatttaaggcagtccttcgcaagccagacgggcaa
tacctttgggaagatggcaaggaacgcatcattgaggtgccgttcggggagccggcagac
ttggagattcagatcactgacgtcaagttcaaaaggcgaacttttaacgaaagtacaagc
ataaacatgctgaaggaagttcagccaaatagctacctgtcgcgctgtaccactgtcaac
agcgacaaggtttcggcaccgaaaagcggtccagaaaactcgctccttgcagcagcaagt
tcgatgcgactgccaaacagcgaagatgagctagaagattatagcagcagcagcagcagc
agcagcagctctctttcagaggatgggccgtctgttccgcgctccatacctcgccggcgc
ctcgtccgccttgacaaaagcagaagcgctgctaatgagcaacctgtagacgacctactc
aaagggattgcatctttggatttgagacccgctgctacacaacgagccggtcgcccaagc
gctgcgccaaatggttccgctgttcatgctatgccgggttcctctccaagtaacgtggcc
ccacctcaagccccatccgaggcatcgggagacagcgacacctctgaaagtgacagcgat
aaagatgtcgcccctttctatgagcgtctggttccatccttgggggccaaggcaaccgcg
gccaaggccacctcttcagcacctcctaagcctgagccaggttctctggtgctcggtgag
gaccagcagtatgtgcttggagctcacgtggcgcagaagctttacccacaccaggttcag
ggggtgaaatggttgtggaacctgttctccatgcagcgcggtggtatactcggcgatgac
atggggctcgggaaaaccatgcagatttcggcattccttgctggcctttttgggagccag
ctggtacgtcgtgccatcatcatcgcgcccaagaccctccttccgcactggataaaggag
ctcaccgtgtgcgggcttcgcaaccttacccatgagttctttgggaactccgagtcggaa
aggtccgcggcacttcgcggcgtagtcagcggccggggtgtaattgtgacgacgtacggt
atggtgcaacacaactccgagcagctggcgcgcccagcgcacagcagcagggaccacgct
tttacgtgggacgtcatgctcctggacgaggggcacaagatcaagaaccccaagatgaag
ctggtggagcacttgaacaagctgccggcgcgagtgcgtgttatcatcagcgggactcct
attcagaacaacctgatggagatgcacagccttttcgacttcaccaccacgggcctcctc
ggggacgcgaagacgttcaagaagaactacgaacggccaatcaccaagggcctggacaag
gaggcaaccgccagggagcgacagactggcgcggccatcgctgcagagctgcgacagcgc
gtggagccgtatttcctgaggcgggagaagaaagatgtcctgagaaacgatagcagcagc
agcagcaacgacgttggcggccgcggtgacgccacatcggagagcggtccaagctcgtca
tctgggtcggcggcaggggttgccccacaagttggccagcgcgctcggggcttgccgcgg
aagaacgacatgcgcaaaatctatacggcgtttttgcacacggacagtgtccggcaggtt
ctcaacgagaaggcttcaccgcttgccgcaatcactgtcctgaagaagatctgcgatcat
ccagctttgctctctcagcgagcggccaacaacgtgataaagggagcgcaccggtgggcc
aagcatggaggttctcagaggcgggaaatggatgacttcattgtctattcggatgaggat
atcgtcgacagcagcgacagcgatgatgctgaggggggcaagcacggcgacggggagccg
cccgccgggtggttggaagacggagctggtcttgatactgagcttgctcgcgagctggag
cagcggggtgcggaggcttcctgcaaatctgcgtttgtgcttgctcttttggggaggcta
catgctgagggccatcgcacactcatcttcagtcagtccaaggtcatgctgagcatcctt
gaggctggcgtgaaggccatgaaactgtcctactgccgcattgacggggacgtggccagc
gcggaggagcggcaggcgcacgtgcagcgcttccagaatagcaacatcccagtcttcctg
ttaacttcccaggtgggcggcttgggcctcacattgacagctgcggacagggttatcatc
gtggaccctgcgtggaatccttccgttgacgaccagagcgtggaccgcgcctatcgcatg
ggccaaacccgcgacgtggtagtgtaccgtctcatcacgtgcggtacggtggaggaaaaa
atttaccgtcgccaggtttttaagggcgggctctctaagacagggaccgaagagggcatc
cagttcagatacttcactcagacggagctgcgtgacctcttctcggtgacaacggagggg
ctacagcagagcgtcacgcaatcgcaactgcacgagatgcatgggcatcagcgagatgcg
tctgaagatgtacggcgacacctggagcaagtccggcgcatggacagtgtcgccggcatt
cacgatcacaatctgctttttactcggcgcccagacgaacacgttccttctgcccaagag
ggccgggcgattttgaatcagatgacgggctctggcccagtgggcttggatgcactgacg
gccaagcttgggagcggcttaaagctggacagtcgcgtcgaggataccaagcgccaagct
cagataaacgagctgcggaacgaggtcgtgaagtcaaaaaacgcaatcgccaattacgaa
tcgttcatctcttctggcaaggccggcgcaatgccagaccgcggcgccaaagtgcgggcc
gtcctgcaagaggtgcggacgaagctagaggcgcagctcgcacagctggctgcgctggag
ggtcgcaacgtggatgctgctactcccgatgctggcacgggtccggacactgggggaacc
cggacgctcccagccgccgttttggtcactgctgctcagggtgcggcgtcaggtccgcat
ctcagccagccccagtctgagcgaccgccggggcccacgcttggggggcgaaggtttggg
gctgggctaaggtctcggtcgctaggcaatggggacagcacgaagagtgagagcgctctt
caggctacaggacaggaccaaccacataagcagcagtcggctgggatgccctgctcgtcc
cgggaccccgttaacggcgctgtgaaa
DBGET
integrated database retrieval system
