KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_121154
Entry
VOLCADRAFT_121154 CDS       T01330                                 
Symbol
puf1
Name
(RefSeq) pumilio family protein
  KO
K14844  pumilio homology domain family member 6
Organism
vcn  Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcn03019]
    VOLCADRAFT_121154 (puf1)
   03009 Ribosome biogenesis [BR:vcn03009]
    VOLCADRAFT_121154 (puf1)
Messenger RNA biogenesis [BR:vcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     VOLCADRAFT_121154 (puf1)
Ribosome biogenesis [BR:vcn03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    VOLCADRAFT_121154 (puf1)
SSDB
Motif
Pfam: CPL PUF PUF_NOP9
Other DBs
NCBI-GeneID: 9625817
NCBI-ProteinID: XP_002953398
JGI: 121154
UniProt: D8U4B0
LinkDB
Position
Unknown
AA seq 793 aa
MAKDTKSAQPAKAAKAAKPFLKSGTKRKGEGQSSAAPPAKRARDENGKSPDGERQKKLHT
KDKRAVIREKKLQHKKNWNVIQDSVYLWEKLRPKDTSDIERRELVSNILKKVKGKLLELS
NHHTASRVIQFCVKYGGDVERRTVMDEVRANVVELSKSKYGHFLVRKLINTAKKDEVPGL
VRLFRGHVAQLLRQPYGADVITDLYDVASTADRNALCSEFYGKEFVLFDGISGEAGRLYS
LKQLMTNSPAAKQRAIIQHMTKALTPIVEKALLDPPITHRLVKEYLECATGLSVEEAVET
LSQTGEAVLRMVHTHEGAAAACMVLAYGMPRDRKRVVRAMKGHVAAMAADEWGHTVLCMA
LACVDDTSLTSKVVVSELKELLQEGVHQPNAVRVLHQLLSPDCRRHFPPAIYEMLHPPQR
VVRGSTGKSVTDLEGEEDEEMDFGGAVPEDDADEDGGELFSKEAKGKSSNKPKARGKVLA
TGADEDMEDPADKTGNGGTAEVEGVPNETDDAAAERVLGASKKDPRLRRRELLGSGPKSL
SVKLTQVVAAEAPALLRSPHSCELVVEVARGGESGLLFELEPDGVRSVHAAIIEDAARSP
EDVAAEAGVEEDAPEAPSTSGREHVLLSYYSSRALRRLLLLAADEQPAGAAGAFASEIWA
NALKGRCKQWVGTHAEKVLVALLQCGVQPVVTAATKELKPLVKQPLEEWAGRFLGQKGKE
GDKQVESRLEQGAEQATQGKVEGRNGKSDGKQSGAAEAGKQRGGLKEPKMKSGGKDKRVG
AGLDKGKVIKVKR
NT seq 2382 nt   +upstreamnt  +downstreamnt
atggctaaagatacaaagtctgcacaaccggcgaaagcagcgaaagcggctaagcctttt
ctcaagtctggcaccaagcggaaaggtgaaggccaatcgtcggcagcgccgcctgcgaag
cgtgcacgggacgaaaatggtaaaagtcccgatggcgaaaggcagaagaaacttcacacg
aaggacaagcgagccgtcattcgtgagaagaagctccaacacaagaagaactggaatgta
atccaggactcggtgtacttatgggagaagctacgtccaaaggatacgtcggatatcgaa
cgcagggagctggtgtcgaacattttgaagaaggtgaagggcaagctattggagctatcc
aaccaccacaccgccagccgtgtcatccagttttgcgtcaagtacggtggtgacgttgag
cgtcgtacggttatggacgaagtgcgtgccaacgtggtggagctctcaaagagcaagtac
ggtcacttccttgttcgcaagctgatcaacacggcaaagaaggacgaggtgcctggtctc
gtccggttattccgaggtcacgtcgcccaacttctgcgtcagccttacggtgccgacgtg
attaccgatctatacgacgtggcgagtacggcggaccgtaatgctctatgttcagagttt
tacggcaaggagttcgtgttgttcgatggcatctcgggcgaggcgggccgcttgtatagc
ctaaagcagctcatgacgaactctccggcggcgaagcagcgcgccatcatccagcacatg
acaaaggcgcttactcctattgtggaaaaggcgctcttggatcctccaatcacgcacagg
ctggtgaaggagtacctggagtgtgctacggggctgtcggtagaggaggcggtggagacc
ctttcacaaaccggcgaggcagttctgcgtatggtgcatacccacgagggtgcggcggca
gcgtgcatggtacttgcatacggcatgccccgtgatcggaagcgcgtggttcgcgccatg
aaaggtcatgtggcggcgatggcggcagacgagtggggccatacggtgctgtgtatggcg
ctggcgtgcgtggatgatacttcacttacaagcaaagtcgttgtttcggagctcaaggag
ttgctgcaagagggcgtgcatcagcctaatgccgtgcgggtgctgcatcagctgctttca
ccagactgccgccggcattttccgcctgccatttacgagatgcttcatccaccccaacgt
gtagtcaggggctccactggcaaatccgttacggatttggagggcgaggaggacgaggaa
atggacttcggtggggccgtacccgaagatgacgcggacgaggacggtggcgagctcttc
tcaaaggaggctaaagggaaaagttcaaacaagccgaaagcgcgtggcaaggtcttagct
accggtgctgacgaggacatggaggatccggcggacaagactggaaatggtggtaccgcc
gaggtcgagggggttcccaacgagaccgacgatgctgcagctgaacgagtgttgggtgcc
agcaagaaggacccccggttacgtcgccgggaactgctgggaagtggacctaagagcctg
tccgtcaagctgacacaggtagtggcggcagaggcgccggcactgttgcgatcgccacac
agttgcgagctggtagtcgaggtggcgagaggcggggaatcaggtctgctgttcgagctg
gaacctgatggggtgcgttccgttcacgcggccattatagaggatgcggcaaggtccccc
gaggatgtagcagcggaggctggtgttgaagaggacgccccggaagcgccgtcaacatct
gggcgtgaacacgtgttgctatcttactattcgagtcgcgctctgcgacgattgctgctg
ctggcagcggacgagcagcctgccggtgctgccggtgccttcgcatccgagatatgggcc
aatgccctcaaggggcgttgcaagcagtgggtcggaacgcatgctgagaaggtcctggtg
gcactattgcaatgtggagtgcaacctgttgtgacagcagcgacaaaggagctgaaaccg
ctggtaaagcagccactcgaggagtgggctggcaggttcctgggccagaagggcaaggaa
ggcgacaagcaagtggagtctcggttggagcaaggggcagagcaggcgacccaggggaag
gttgagggacggaatgggaagtcggatggaaagcagtctggggcagcggaggcggggaaa
cagcgagggggcctgaaggaaccgaagatgaagtccggtggtaaggacaagcgtgttggt
gcggggctagacaagggaaaggttataaaggtgaaacggtaa

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