Volvox carteri f. nagariensis: VOLCADRAFT_121154
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Entry
VOLCADRAFT_121154 CDS
T01330
Symbol
puf1
Name
(RefSeq) pumilio family protein
KO
K14844
pumilio homology domain family member 6
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_121154 (puf1)
03009 Ribosome biogenesis [BR:
vcn03009
]
VOLCADRAFT_121154 (puf1)
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
VOLCADRAFT_121154 (puf1)
Ribosome biogenesis [BR:
vcn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
VOLCADRAFT_121154 (puf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPL
PUF
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
9625817
NCBI-ProteinID:
XP_002953398
JGI:
121154
UniProt:
D8U4B0
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MAKDTKSAQPAKAAKAAKPFLKSGTKRKGEGQSSAAPPAKRARDENGKSPDGERQKKLHT
KDKRAVIREKKLQHKKNWNVIQDSVYLWEKLRPKDTSDIERRELVSNILKKVKGKLLELS
NHHTASRVIQFCVKYGGDVERRTVMDEVRANVVELSKSKYGHFLVRKLINTAKKDEVPGL
VRLFRGHVAQLLRQPYGADVITDLYDVASTADRNALCSEFYGKEFVLFDGISGEAGRLYS
LKQLMTNSPAAKQRAIIQHMTKALTPIVEKALLDPPITHRLVKEYLECATGLSVEEAVET
LSQTGEAVLRMVHTHEGAAAACMVLAYGMPRDRKRVVRAMKGHVAAMAADEWGHTVLCMA
LACVDDTSLTSKVVVSELKELLQEGVHQPNAVRVLHQLLSPDCRRHFPPAIYEMLHPPQR
VVRGSTGKSVTDLEGEEDEEMDFGGAVPEDDADEDGGELFSKEAKGKSSNKPKARGKVLA
TGADEDMEDPADKTGNGGTAEVEGVPNETDDAAAERVLGASKKDPRLRRRELLGSGPKSL
SVKLTQVVAAEAPALLRSPHSCELVVEVARGGESGLLFELEPDGVRSVHAAIIEDAARSP
EDVAAEAGVEEDAPEAPSTSGREHVLLSYYSSRALRRLLLLAADEQPAGAAGAFASEIWA
NALKGRCKQWVGTHAEKVLVALLQCGVQPVVTAATKELKPLVKQPLEEWAGRFLGQKGKE
GDKQVESRLEQGAEQATQGKVEGRNGKSDGKQSGAAEAGKQRGGLKEPKMKSGGKDKRVG
AGLDKGKVIKVKR
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatacaaagtctgcacaaccggcgaaagcagcgaaagcggctaagcctttt
ctcaagtctggcaccaagcggaaaggtgaaggccaatcgtcggcagcgccgcctgcgaag
cgtgcacgggacgaaaatggtaaaagtcccgatggcgaaaggcagaagaaacttcacacg
aaggacaagcgagccgtcattcgtgagaagaagctccaacacaagaagaactggaatgta
atccaggactcggtgtacttatgggagaagctacgtccaaaggatacgtcggatatcgaa
cgcagggagctggtgtcgaacattttgaagaaggtgaagggcaagctattggagctatcc
aaccaccacaccgccagccgtgtcatccagttttgcgtcaagtacggtggtgacgttgag
cgtcgtacggttatggacgaagtgcgtgccaacgtggtggagctctcaaagagcaagtac
ggtcacttccttgttcgcaagctgatcaacacggcaaagaaggacgaggtgcctggtctc
gtccggttattccgaggtcacgtcgcccaacttctgcgtcagccttacggtgccgacgtg
attaccgatctatacgacgtggcgagtacggcggaccgtaatgctctatgttcagagttt
tacggcaaggagttcgtgttgttcgatggcatctcgggcgaggcgggccgcttgtatagc
ctaaagcagctcatgacgaactctccggcggcgaagcagcgcgccatcatccagcacatg
acaaaggcgcttactcctattgtggaaaaggcgctcttggatcctccaatcacgcacagg
ctggtgaaggagtacctggagtgtgctacggggctgtcggtagaggaggcggtggagacc
ctttcacaaaccggcgaggcagttctgcgtatggtgcatacccacgagggtgcggcggca
gcgtgcatggtacttgcatacggcatgccccgtgatcggaagcgcgtggttcgcgccatg
aaaggtcatgtggcggcgatggcggcagacgagtggggccatacggtgctgtgtatggcg
ctggcgtgcgtggatgatacttcacttacaagcaaagtcgttgtttcggagctcaaggag
ttgctgcaagagggcgtgcatcagcctaatgccgtgcgggtgctgcatcagctgctttca
ccagactgccgccggcattttccgcctgccatttacgagatgcttcatccaccccaacgt
gtagtcaggggctccactggcaaatccgttacggatttggagggcgaggaggacgaggaa
atggacttcggtggggccgtacccgaagatgacgcggacgaggacggtggcgagctcttc
tcaaaggaggctaaagggaaaagttcaaacaagccgaaagcgcgtggcaaggtcttagct
accggtgctgacgaggacatggaggatccggcggacaagactggaaatggtggtaccgcc
gaggtcgagggggttcccaacgagaccgacgatgctgcagctgaacgagtgttgggtgcc
agcaagaaggacccccggttacgtcgccgggaactgctgggaagtggacctaagagcctg
tccgtcaagctgacacaggtagtggcggcagaggcgccggcactgttgcgatcgccacac
agttgcgagctggtagtcgaggtggcgagaggcggggaatcaggtctgctgttcgagctg
gaacctgatggggtgcgttccgttcacgcggccattatagaggatgcggcaaggtccccc
gaggatgtagcagcggaggctggtgttgaagaggacgccccggaagcgccgtcaacatct
gggcgtgaacacgtgttgctatcttactattcgagtcgcgctctgcgacgattgctgctg
ctggcagcggacgagcagcctgccggtgctgccggtgccttcgcatccgagatatgggcc
aatgccctcaaggggcgttgcaagcagtgggtcggaacgcatgctgagaaggtcctggtg
gcactattgcaatgtggagtgcaacctgttgtgacagcagcgacaaaggagctgaaaccg
ctggtaaagcagccactcgaggagtgggctggcaggttcctgggccagaagggcaaggaa
ggcgacaagcaagtggagtctcggttggagcaaggggcagagcaggcgacccaggggaag
gttgagggacggaatgggaagtcggatggaaagcagtctggggcagcggaggcggggaaa
cagcgagggggcctgaaggaaccgaagatgaagtccggtggtaaggacaagcgtgttggt
gcggggctagacaagggaaaggttataaaggtgaaacggtaa
DBGET
integrated database retrieval system