Volvox carteri f. nagariensis: VOLCADRAFT_121350
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Entry
VOLCADRAFT_121350 CDS
T01330
Symbol
eif5B
Name
(RefSeq) eukaryotic translation initiation factor 5B
KO
K03243
translation initiation factor 5B
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
vcn03012
]
VOLCADRAFT_121350 (eif5B)
Translation factors [BR:
vcn03012
]
Eukaryotic type
Initiation factors
eIF-5
VOLCADRAFT_121350 (eif5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
MMR_HSR1
GTP_EFTU_D2
HflX_C
tRNA_bind
Roc
Motif
Other DBs
NCBI-GeneID:
9621563
NCBI-ProteinID:
XP_002954887
JGI:
121350
UniProt:
D8U864
LinkDB
All DBs
Position
Unknown
AA seq
1817 aa
AA seq
DB search
MSVVVTNAANVEEGMKVVFAPVGSTTPGSGLKMERKQLKGVESFGMLCSAYDIGWIPEPD
NILVVLPDNAVVGEPCPKEAPKGLKSKLLSSAVDGEEAEEEEEAAAAVAAKPKKDAKGGK
KGKKGGKDMSSLFAALEEDAAEAVEEEEVEPVPKPKSGKDKKAKRGGKDMSSLFATLEED
AEGGGSKAEEEEAEEPAPKPKASKGKKGGKDMSSLFAALEEDAAGGAKEPEEEEEEEPAP
KPKASKSKKGGKDMSSLFAALEEDAAASTSTAVAEDDGDAAAPKKKDGKKSKKTGKDIDS
LLAALEGDAATSSAPAAEGPAAAAQDDGDAPKQKKEKKKKKDMSDLFAALEADAEASSTP
APAVPEKPSPAAAGKGGKAAAKNKEEEEVEALLAELDKPKEPAAVDAAITSERVSAMAVL
PKAHQESGFLLCLIVLKQELNCAIWHPTGKKNDKKKKGKGGKAEKEDEDIDALLAMIDGP
KQQQAKPVEVTAPAPAVAEPVAADGEGGEGEEGADEAGGEEGGEGGKELTAAQKKKLKKK
QKEKEKKAAATEGGAPAAEGAAAPAEVAAEEEAATGGKGKKGKPVKESAIAKKLREQLEA
RKKAEEEAARLEAERRAREEEELRRLEEEERRKEEEKQRKKEAQRLKREQLKREGKLLTG
KAKEEAERRAAMAAQLLAKAAEKGIDLSQPAEAEKKKKVVYSSKKKLGKKAPGQEGDREG
SPEAPAEAEAAASPKEAAAAAAPAEAAVLAEATVAAVAEEPAAAAGPAAAAAPEPEPEAL
VDDWDAVDDWDKIDPDALLASKKTKEQEEAEARAAAEAEAKAKAEAKAKAEAEAKAKAEA
EAKAKAEAEAAKAAAAAKATANGKAAVKPVKEAPKAAAKPKDVDEDESASEEESEEDEES
GSESGSEESGSEEESSEEESSEEESSDESDDDDEDDSDDYSEDSEEARQQRIDEARERRL
ARAAEARKNANKEQLRSPICCILGHVDVGKTKILDNIRRTNVQDGEAGGITQQIGATFVP
AEAVERRTETLRGGRAFDMKLPGLLVIDTPGHESFTNLRQRGSGLCDMAVLIVDLVHGLE
QQTIESINLLKMRKTPFVIALNKASRCRHNCRSNRDVDRLYGWKSVPDSPIRDSFKRQKE
FVMSEFEQRCSQVFLQLNEQGLNVSLYWKNSDPRKFVNVVPTSAITGEGIPDLLQLIVKL
TQTMMTDRLMFVADTQCTVLEVKTMEGLGTTVDVVLVNGVLREGDKIVVCGLGGPIVTRI
KALKTPQVLRELRVKGALMEHKEIRAAMGVKIVAPGLESAVAGTSLFVVSPDDDEEELKD
AVMEDMADIFSKVDKGGEGVCVQASTLGSLEALLAFLSSPEVNIPVSGINIGPVHKRDVL
RANVMNEKKCPKYAVILAFDVPVSKEARDLAEDYNVKVFTADIIYHLFDQFTAYVKQVKS
AEQEAARFKAVFPVVLRILPTCVFNKKDPIVVGVDIAEGIAKIGTPVAAQTEAGLVELGR
IAGMEINHKAVEKARAGESVAMKIEGQTTEEKSRLFGRHFDHTHQLVSVISRESIDALKE
YFADEMTKDDWRLVIKLKKVFQSRHSPRLAFSGVHVHEHNRRGVHTHRARLVSSIYLRSR
YCHCKPLISLLHFVLISAMADQVLPGNIPNNNNQNNPNNVVIQPPAAAQGVPAQVVEQLV
QDQNFNAVFTNISAGREEALSRRYTDLEQNHEASCPKAFKFMAAWIRDIGSKVYSAHSAL
KVIQATVADVGPIVDILQQSVFIMDLLYASCDAGGRCHQFHLEVMQQYFNNNRHQAVSPT
AEVKADTNRLYDCGCGI
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggtggtgacgaatgccgccaacgtagaagagggcatgaaggttgtctttgcg
cctgtgggctcgaccacaccgggcagcggtcttaagatggagcgcaagcagctgaaggga
gtggagagctttggcatgctgtgttccgcgtacgacattgggtggatcccggagccggat
aacatcctagtggtgttgccggacaacgcagtagtgggcgagccatgccccaaggaggcc
cccaagggcctcaaatccaagctgctctcctcagcggtggatggggaggaggctgaagag
gaggaagaggccgcggcggcggtggctgccaagcctaagaaggatgccaaaggtggcaag
aagggcaagaagggcggaaaggacatgagcagcctgttcgctgctctggaggaggatgcc
gcagaggcagtggaggaagaggaggtggaaccggtcccaaagcccaagtctggcaaggac
aaaaaggcgaagagaggcggcaaggacatgagcagcctgttcgcgacattggaggaggat
gctgagggcgggggctctaaagcggaggaagaagaggcggaggagccggctcccaagccc
aaggccagcaagggcaagaagggcggaaaggacatgagcagcctcttcgctgccctggag
gaggatgccgcgggtggagcaaaagagccggaggaagaagaggaggaggagccggctccc
aagcccaaggccagcaagagcaagaagggcggaaaggacatgagcagcctgttcgctgct
ctggaggaggatgccgcggcgtccacgtctacagcggtggccgaggacgacggcgacgca
gcagctcctaagaagaaggacggcaagaagagcaaaaagactggcaaggatattgacagc
ttacttgccgccctagaaggagatgccgcgacatcgtcagcgccggcagccgagggtccc
gctgcagctgcccaggatgacggggacgcgcccaagcagaagaaggagaagaagaaaaag
aaggacatgagcgatctatttgcggcgcttgaagctgacgcggaagcctcctccacccct
gcgcctgcggttcctgagaaaccctcaccggcggctgctggcaagggtggcaaggccgca
gccaagaacaaggaggaggaggaagtggaggcgctgctggcggagctggataagcctaaa
gagcccgctgcagttgacgccgccattacgtccgagcgtgtgtcagcgatggccgtcctt
ccgaaggcacaccaggaatctggtttcctattgtgtttgattgtgctcaagcaagagcta
aattgtgcgatctggcatccgacaggcaagaagaacgacaagaaaaagaagggcaagggt
ggcaaagctgagaaggaggatgaagacattgatgcgcttctggctatgattgacgggccc
aagcaacagcaagccaagccagtagaagttaccgctcctgcaccagcggtcgctgagccg
gtggcggctgatggggaaggcggcgaaggtgaagagggtgctgacgaggccggcggcgag
gaaggtggcgagggcggcaaggagctgacggcggcgcaaaaaaagaaactaaaaaagaaa
caaaaggagaaggagaaaaaggccgcggcaacagaaggcggcgccccggcggccgagggt
gccgctgcgcccgcggaggtagcagcggaggaggaggcggcgacgggcggcaagggaaag
aagggcaagcccgtcaaggagagcgccatcgccaagaagctgcgtgagcagctagaggcg
cgcaagaaggcggaagaggaggcggccaggctggaggccgagcggcgcgctcgtgaggag
gaggagctacggcgactggaggaggaggagcggcgcaaggaggaggagaagcaacggaag
aaggaggcgcagcggctcaagcgcgagcagcttaaacgtgagggcaagctgctgacgggc
aaggcgaaggaggaggctgagcggcgcgccgcaatggccgcgcagcttctagccaaggcg
gctgagaaaggaatcgacctgagccagcccgccgaggcagagaagaagaaaaaggtcgtc
tacagcagtaagaagaaacttggcaagaaagctcctgggcaggaaggcgaccgtgagggc
tcacccgaggcgccggcagaggcggaggcagcagcgtcgccaaaggaggcggcagccgcg
gcagcgccagccgaggccgcggtgttggcggaggccaccgtggcggccgtggcggaagag
ccggcggccgcagcgggtcctgcagcggcggccgcgccggagccggagccggaggcgctg
gtggatgattgggatgcggttgatgactgggacaagattgatccggacgctctgttggct
tccaagaagaccaaggagcaggaagaggcggaggcgcgcgcggccgcagaggcggaggcg
aaggccaaagccgaggcgaaggcgaaggcggaagctgaggcaaaagccaaggcagaagcc
gaagctaaggcaaaagcggaggcggaggcggcgaaggccgcggctgccgccaaggcgacc
gccaacggcaaagcagcggtcaagccggtgaaggaggcaccgaaagctgcggcgaagccg
aaggacgtggacgaggacgagagcgcctccgaagaggagtccgaggaggacgaggagtcc
gggtctgagtcgggcagcgaggaatcaggaagcgaggaggagagcagtgaggaggaaagc
agcgaagaggagagcagcgatgagagtgatgatgacgatgaggatgacagtgacgactac
agcgaagacagcgaggaggcgcgacagcaacgcattgatgaagcgcgggaacgccgactg
gcgcgtgccgctgaggcccgtaagaacgccaacaaggagcagctgcgctcgcccatttgc
tgcatcttgggtcacgtcgacgtgggcaagactaagatcctagataacattcgccggaca
aatgtgcaggatggcgaagcaggcggtatcacgcagcagattggtgccacgttcgtgcct
gctgaggctgtggagcgccgcacggagacactgcggggtggtcgtgccttcgacatgaag
ctgcctggtctgctggtcattgacacgcccggtcacgagtccttcaccaacctgcggcag
cgcggcagtggcctttgtgacatggctgtgctcatcgtggatctggtgcatggcctggag
cagcagaccatcgagtccatcaacctgctcaagatgcgcaagacgcccttcgtcattgcg
ctaaacaaggcaagcagatgcaggcacaactgcagaagcaaccgggatgtggaccgtttg
tacggctggaagagcgtgcctgactcgcccatccgtgactcgttcaagcgccagaaggag
tttgtgatgtccgagtttgagcagcgctgcagccaggtcttcttacagctcaacgagcaa
ggattgaacgtgtcgctgtactggaagaactccgacccgcgcaagttcgtcaacgtggtc
cctaccagtgccatcaccggcgaggggatccccgacctgctgcagctgattgtcaagctg
acgcaaaccatgatgacggaccgcctcatgttcgttgcggatacacagtgcacggtgctc
gaagtgaagaccatggagggtctgggtaccaccgtggatgtggtgctagtcaacggtgtg
ttgcgggaaggcgacaagatcgtggtgtgcggtctaggaggtcccatcgtcaccaggatc
aaggcgctcaagacgccgcaggtgctgcgtgagctccgtgtcaagggcgcgctgatggaa
cacaaggagattcgagcggccatgggagtcaagattgtggcccctgggctggagtcggca
gtggcgggaaccagcctgttcgtcgtgagccccgacgacgacgaggaggagctcaaggac
gcggtgatggaggatatggcggacatcttctccaaggtcgacaagggcggagagggcgtg
tgcgtgcaggcctccacgctgggctccctggaggcgttgttggccttcctgtccagtccc
gaggtcaacatcccagtttcaggcatcaacattggccccgtgcacaagcgcgatgtcttg
cgcgccaatgtcatgaacgaaaagaagtgccccaagtacgcagtcatcctggccttcgat
gtgccagtgtccaaggaggcacgcgacttggcggaggactacaacgtcaaggtctttacc
gccgacatcatctaccacttgtttgaccagttcacggcctacgtaaagcaggtcaagagc
gccgagcaggaggccgcaaggttcaaggccgtctttcccgtggtgcttcgcatcttgccc
acttgcgtcttcaacaagaaggaccccatcgtggtgggcgtagatatagccgagggtatt
gccaagataggcacaccggtggctgcgcagactgaggcggggctggtcgagctgggccgg
attgcgggcatggagatcaaccacaaggcggttgagaaggcccgggcgggcgagagcgtc
gccatgaagatcgagggtcagacgacggaggagaagtcgcgcctattcgggcggcacttt
gaccacactcaccagctggtgtcggtcattagccgcgagtccattgacgcgcttaaagag
tacttcgcggacgagatgacgaaggacgactggcgcctggtcatcaagctcaagaaggtc
ttccagtctcgtcattccccgcggcttgcattcagcggcgtgcacgtgcacgagcacaac
agacgcggtgtacacacacaccgcgcccgcctggtgtctagcatttacctaaggtcacga
tactgtcattgtaagcccttaatttctctactacactttgtgttgattagcgcaatggct
gaccaagttctgccaggaaacattccgaacaataataaccagaataacccgaataatgta
gttattcagcctcctgctgcagctcaaggcgtgcccgcgcaagtcgtagagcagctggtt
caggaccagaacttcaatgcggttttcacgaacattagcgcgggcagggaggaggctctg
tcgaggaggtatacagacctggaacagaatcacgaggcttcgtgcccgaaggcgtttaag
ttcatggcggcgtggattcgcgacatcgggtccaaagtctactcggcacactccgctctg
aaggtcattcaggctacggttgcggacgtagggcccatcgtggacattctgcagcaaagc
gttttcataatggacctgctttacgcgtcctgcgatgctggtggtcggtgccatcagttt
cacctggaggtaatgcagcaatactttaacaataatcggcatcaagctgtcagtccgacg
gcggaggtcaaggcggacacgaatcgcctatacgactgcggctgcggtatatag
DBGET
integrated database retrieval system
