KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_121408
Entry
VOLCADRAFT_121408 CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K03132  transcription initiation factor TFIID subunit 7
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    VOLCADRAFT_121408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vcn03021]
    VOLCADRAFT_121408
   03036 Chromosome and associated proteins [BR:vcn03036]
    VOLCADRAFT_121408
Transcription machinery [BR:vcn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     VOLCADRAFT_121408
   Coactivators
    SAGA/TFTC/STAGA complex
     VOLCADRAFT_121408
Chromosome and associated proteins [BR:vcn03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     VOLCADRAFT_121408
SSDB
Motif
Pfam: TAFII55_N
Other DBs
NCBI-GeneID: 9616396
NCBI-ProteinID: XP_002955352
JGI: 121408
UniProt: D8U9J1
LinkDB
Position
Unknown
AA seq 177 aa
MAEGAGTEEQFVLRVLDEALADKLHRMLREEITAHGHIELNFSDNNQDGVLTVDGMPYPV
KLLNLPTVVEAYKTYDDVNMVKINDVGQLLLVGPPGSSLPEGPESADGVTPPMRNARQRH
FKTLPKVDPAEVTAAERDLLALLSGFAPGGMTITDVEEEFAVDEETGTGSWRPLKSK
NT seq 534 nt   +upstreamnt  +downstreamnt
atggctgagggtgcgggcacggaagagcaattcgtcctgcgtgtgttggacgaggcgctg
gccgacaagttgcacaggatgctacgggaggagattaccgcacatggccacatagagctg
aatttctcagacaacaaccaggacggcgtgctaaccgtcgacggcatgccgtaccccgtc
aaactgctcaatctgcctaccgtcgtggaggcgtacaaaacgtacgatgatgtgaacatg
gtgaaaatcaacgatgtgggacagctgctgctggtagggcccccgggcagcagtctccct
gaagggcccgagagtgcggacggcgtcacaccccccatgcgcaatgcccgacagcggcac
ttcaagacgctgcccaaggtggaccccgcggaggtgacggcggcggagcgggacctgctg
gcgctactgagtggcttcgcacccgggggcatgaccatcacggacgtggaggaggagttt
gcggtggatgaggagacagggacggggtcttggaggccgctcaagagcaaatag

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