Volvox carteri f. nagariensis: VOLCADRAFT_121578
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Entry
VOLCADRAFT_121578 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K14947
epithelial splicing regulatory protein 1/2
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_121578
Spliceosome [BR:
vcn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
VOLCADRAFT_121578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
9622652
NCBI-ProteinID:
XP_002956881
JGI:
121578
UniProt:
D8UE08
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MSSSSSQVQQSLAGTLAAPITALPHDGSVVKMKGLPFKGGKEDIIKFFAGFTVRPDQVFL
RKHPDGRPNGEAFVVFEDSDEARRATQKDRETFGEKFGDRYVRVYPTLDSDIPDMQAAVA
QAQLHEQAQGSGNHGHGAHSDSVVKIKSLPFDATQLDIIQFFENFKLKPNGVQLVVRSDN
KPTGEAFVDFETPEEAARSIKEKDHKVFSEKFGDRYVRLIQVSRKEMQATLALRFGGEGV
LKMKGIPFKATAVDVRKFFTGYKVKTEGVSFIMHADGRPTGMAFIEFETPQEAVRAMEKD
RAKFGPEYGDRFCMLQLVGRHEMEKVTLQRENENTANKLLNGINVLQAAALATHAALNNP
ALQPILMAGPNPWLNPIYQGMGLVNPATANPAAAAAALAANAQLAQVPGASPTAPMLDAS
ALSAATQYGGPLPQGPQLVNGGMNAAALSLLQQQQAPASAGGVSVDPTTSTVGWPLDPAA
AAAASNLQLFYQNAASTAPQDWARAAAATAADPRLVPGMTATLDNMPANSVTPHSLAPPT
PLDLIAMKETIPVVAALGKSLGVAAAPPLHPPVYGAPLACIRPEGVPVPPAAALAATAAA
GMPASIAMPVAVDDPAAVARAAAGNSVM
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgtcttcccaagtgcagcagtctcttgcgggcacgctggcggcgcccatt
acagctctgcctcatgatggctccgtggttaagatgaagggcttgcccttcaagggcggc
aaggaggacatcattaagttctttgcgggcttcacggtccggccagaccaggttttcctg
cgtaagcatccggatggccgtcctaatggcgaggcgtttgtggtctttgaggacagcgac
gaggccaggagggctacacagaaggaccgtgaaacatttggagaaaagtttggagaccgc
tatgtgcgggtgtaccccacgctcgactcggacatcccagacatgcaagccgccgtcgcc
caggcacagcttcatgagcaagcacagggctcaggcaaccatggtcatggagctcattca
gatagcgtggtaaagatcaagagcctgccttttgacgcaacccagctggacattattcag
ttctttgagaacttcaaactcaagcctaatggcgtccagctagtggttcgctcggataac
aagccaacgggcgaggcattcgtggacttcgagacacccgaggaagcggctcgctccatt
aaggagaaagatcacaaagtcttttcggagaagtttggcgaccgttatgtccggttaata
caggtgtcccgtaaggagatgcaagccacactcgcccttcggttcggtggcgagggtgtg
cttaagatgaaggggattcctttcaaggccaccgctgtggacgttaggaaattcttcacc
ggctacaaggtcaagacggagggcgtaagctttatcatgcacgcggatggccggccgacg
ggaatggcatttatcgaatttgagactccgcaggaagctgtccgcgccatggagaaggac
cgcgccaagtttggcccagaatacggtgaccgattctgcatgctgcagctcgtcggccga
catgagatggaaaaggtcaccttgcagcgggaaaatgagaacacagccaacaagctgttg
aacggcatcaacgtgttgcaggcagctgctctggcaacccatgccgctctcaacaaccca
gcgctgcagcctattctcatggcggggccgaatccgtggctcaatccgatctaccagggt
atgggtctcgtcaacccggccacggctaatccagctgcggccgcagcagcactagcggcg
aatgcacagcttgcgcaggtccccggcgcatcgccaaccgcgccgatgctggacgcatcc
gcgctgtcggcggcgacgcagtacggtggacccctaccccaagggcctcaactggtcaac
ggcggcatgaatgcggccgccctgagccttttgcaacagcaacaggcgccggcgtccgca
gggggagtgagcgtggacccgacgacgtcgacggtgggctggccactggatccggccgcc
gccgctgcggctagcaacctgcagcttttctatcagaacgccgcatcgacagcgccgcag
gactgggcccgtgcagcggccgcgaccgctgcagatccgcggctggtaccggggatgacg
gcgactttggacaatatgcccgccaacagcgtcacgcctcattccctggcgccccctaca
ccattggatttaatagctatgaaggaaacaataccggtggttgcggcgcttggtaagtcg
ctcggagtggcagcggcaccaccactgcatccgccggtgtacggtgcaccgctagcctgc
atacgccctgaaggggtgcccgtaccgccagctgctgcattggctgctacggcggctgcg
gggatgccggcttccattgcgatgccggtggcagtggacgacccggcggcggtggcccgg
gcggcggcggggaactctgttatgtga
DBGET
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