Volvox carteri f. nagariensis: VOLCADRAFT_127148
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Entry
VOLCADRAFT_127148 CDS
T01330
Symbol
mat3
Name
(RefSeq) retinoblastoma-like protein
KO
K04681
retinoblastoma-like protein 1
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcn03000
]
VOLCADRAFT_127148 (mat3)
Transcription factors [BR:
vcn03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
VOLCADRAFT_127148 (mat3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
EGL-1
Motif
Other DBs
NCBI-GeneID:
9624619
NCBI-ProteinID:
XP_002954473
JGI:
127148
UniProt:
D8U756
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MDTLNRNGPLNDRISFLLKEVNFGDAISQEGFLQLYRELRASYECQENASPASDYAGEQD
EEVKHLCTQASLLFVARVLFAAQAQGGRTVSNFGCPISRIVAAAGISLLDFFREVNVVVS
KLSSYFEARGGSSRLFAQQAQLKENSETVVVMGLLAKKYKQDNFGMLLHQLDFFKQIVLK
LGWNAFLVLRIKLLSSFPDVVVRSCVELLPCVFAILVSHAPQLPDCLSHVSGAEYRSALL
KSLSAEICKADYSRVQARIPSVEALLSHVLTSAVPEWREAASHAQLESNLAKSATAAEKC
TFPGVVDLVSSKAGRLLEGLVTDGNRMQRALSALETEYAQHYTRGGSELDEREFLFTDFT
KFASPRFSPRHMQSAVMKLRAGPLPIRQGSLLGPGAHTTASYAISPSSMNPKTSLLARMH
SPLPKLNLGVETGPPVTPVSEIMSTSAWLRGITASLAAEVRDVAPLVNVQPSPSVMRYLA
EVAVPPDGEQGACVTVTLSAAEQLNQRVQELVSCIMPEEKIPSLLGSFPLLQPSLVSERR
IEVTKVYYLSLERILQAEEKNNGVAGVTSLLSAGKFHRALVACSAEVVTACYRMVSCTFP
KVCSWPQVLDALHIKAFDLAKMIQCFVRSITTLPRSVRDLKRHLFLVEEKILESLAWEAD
SPLYSLICSTVAQDELLEECATFEDDTSFLPDTADKTMQAPKSLVLIPDTSASPLSTKRP
QDSNVLEFSPVKKARMEGSQHAVHRYLRKLPPCIGAKFVESAHTDGCAAALNHFCCKVRK
QVLKLAAFRLAVLCDNFDFSPLQRLDVNTKVWVYQTIEHALFFQTHLFYNRHIDQIILSA
LYGFCKVHRLAQVSFREIIAHYRKQPQAQPSIFRSVVVEQSNPSLQVGQVGRRADIIAFY
NQVFVPCMKSFLLRSGKGEYPGTIGPTIGSPDNVTGELKGDISISCGAPAMEGELSAAHD
SAGKMTQIMKQLGLEALRSPGTEHQRSHAGNRGVLMRFGVPTDNAVDGVHVMDSAQNCAA
LLTSAHEMEVRAGLNTCTPGKRTEHQIPDNCGTESQQYCEVGSRLNAGPGWVLRPVGLDG
GPKSCTGLDQSFNGQAACAGLDVFDDADTYDCSQFQKTCRRQRTPNRKHGSD
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggatactttaaaccgtaacggcccgctcaatgataggatatcctttctgctgaaggag
gtgaatttcggtgacgccatttcacaggagggatttcttcagctgtaccgggagcttagg
gccagttatgagtgccaagaaaatgcatcacctgcttcagactacgcgggcgagcaggat
gaagaggtcaaacatctttgtacacaggcgagccttcttttcgtggcgcgcgtacttttc
gcggcgcaggcgcaaggaggcagaacagtatccaactttggctgtccaatatcacggatt
gttgctgctgcgggcattagtcttcttgattttttccgcgaggtgaatgtcgtggtcagc
aagctttcttcatactttgaagcgcgtgggggtagttcgcgattgtttgcgcagcaggct
cagctgaaggagaattcggagactgttgtagtcatgggtttgctcgccaaaaagtacaag
caggacaatttcggcatgcttctgcatcagttagacttctttaagcagatagtgcttaag
cttgggtggaacgcattccttgtgctacggatcaagcttttgagttcctttcccgatgtc
gtcgtacgcagttgcgttgaacttctaccgtgcgttttcgccatcctcgttagtcacgcc
ccgcagcttccagactgccttagccatgtcagtggggcagaataccgttcagcacttctc
aaatcactttcagcagagatatgcaaggcagactacagcagggtgcaggcgcgtattccc
agtgtcgaagctctgctctctcatgtcctgacgtctgctgttccagaatggcgggaggcg
gcgtcccatgcccaattggaatcaaacttagcaaaaagtgcaaccgcagcggaaaagtgc
acatttccgggggttgtggaccttgtatctagtaaggcaggtcgtttgctggagggcctt
gtcacagatggcaatcgcatgcagcgcgcactttctgcgttggagacggaatacgcgcag
cattacacacgcggcggcagcgaactcgatgaaagagagttcttgttcacagacttcaca
aaatttgcatcgccccgtttttcaccacggcacatgcagtctgcggtcatgaagctacgt
gcaggcccattacctatccgccaagggtcacttttgggccccggcgcacacacaacagca
tcgtatgcaatatcgccatcctcgatgaatcccaagacgtcactgctggcacggatgcat
tcgcctttaccaaagcttaatctcggcgttgagactggtccacctgtaacgccggtctca
gagataatgagcacgtctgcatggcttcgtggcataactgccagcctggcagctgaggtt
cgcgatgttgcccctcttgttaatgtgcagccgtccccaagcgtaatgaggtatcttgcg
gaagtggcggtacctcctgatggagaacaaggtgcctgcgtgactgtaactctgtcagct
gcagagcagctgaatcagagagttcaagagttggtgagctgcatcatgccagaagagaaa
attccttcccttttgggttcatttcctttgttgcaaccgtcgttggtgtcagagcggcgt
attgaggtcactaaggtatattaccttagcctggagcgcatcttgcaggccgaggagaag
aacaacggtgtggcaggtgttacttccctcctttcagctggcaagttccatcgcgcctta
gttgcgtgttctgccgaggtggtgactgcatgctatcgcatggtttcttgtacgttccca
aaagtatgttcttggcctcaggtgttggatgcattacatatcaaggcgtttgacttggcc
aagatgatacaatgcttcgtcaggagtattacaacgttgccccggtctgtcagggatctc
aaacggcaccttttcctcgttgaagaaaaaatcctcgaatccttggcgtgggaggcggat
tctccactctacagcctcatttgcagcaccgtggcccaggatgaacttttggaagagtgt
gcaacttttgaggacgacaccagttttctgcccgacacagctgacaagacaatgcaggca
cctaagtctctggtgctcatccccgatacaagtgcatcacccctgtcaacgaagagacca
caagactcgaacgtgcttgagttttctccggtgaaaaaagcccgcatggaggggagccag
cacgctgttcatcgttatttgcgaaagcttccaccttgtattggagccaagttcgtagaa
tccgctcacacagatggttgcgcggcagcattaaaccatttctgttgtaaggtaagaaaa
caggtactgaagcttgccgccttcaggcttgcggtcttatgcgataactttgacttcagt
cccttgcaacgtctagatgtcaatacaaaggtatgggtgtatcagaccatcgagcatgct
ctgttcttccagacacacttgttctataatcggcacatcgaccagataatcctctcggca
ctttatggtttttgcaaagttcacaggctggcccaggtttcatttcgtgaaataatcgca
cattaccgcaagcagcctcaagcacaaccgtccatattccgttcggtcgtggttgagcag
tcaaatccaagcttgcaggtaggtcaggtggggaggcgtgccgatattattgcgttctac
aatcaagtctttgtaccttgtatgaagtcttttttactgcggagtggtaaaggagagtat
cctgggaccattggacctaccatcggcagccctgacaatgttactggagaattgaagggc
gatatctcgataagttgtggagcgcctgcaatggaaggcgaactgtcagcagctcatgac
agtgcgggcaagatgacgcaaattatgaaacagttagggctggaggccctaagatcaccc
gggacagaacatcagaggagccatgctggtaataggggggtgcttatgcgttttggtgtg
cctacagataatgcagtggatggagttcatgtgatggattcagcacagaactgtgcggcg
ttacttacctcagctcatgaaatggaagtgcgtgctggcttgaacacgtgcacacctggg
aagcgaaccgagcaccaaataccagataattgtgggactgagtcgcagcaatactgtgaa
gtgggatctagacttaacgctggacctggatgggtacttcgccctgttggccttgacggc
ggtcccaagagttgtacaggcttagaccaaagctttaacgggcaggcagcttgtgctggc
ctggatgtatttgatgatgcggatacctacgactgttcacaatttcagaagacctgcagg
cgccaaaggacgccgaatcggaagcatggaagtgac
DBGET
integrated database retrieval system