Volvox carteri f. nagariensis: VOLCADRAFT_127316
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Entry
VOLCADRAFT_127316 CDS
T01330
Symbol
cdc20
Name
(RefSeq) activator and specificity subunit of anaphase promoting complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
VOLCADRAFT_127316 (cdc20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vcn04121
]
VOLCADRAFT_127316 (cdc20)
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_127316 (cdc20)
Ubiquitin system [BR:
vcn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
VOLCADRAFT_127316 (cdc20)
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
VOLCADRAFT_127316 (cdc20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_HPS5
eIF2A
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_1st
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_IFT140_2nd
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_DCAF4
RMC1_N
Motif
Other DBs
NCBI-GeneID:
9626311
NCBI-ProteinID:
XP_002955211
JGI:
127316
UniProt:
D8U9C1
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MSGVQPPTPGSKAGGSPGGGNKSVKLSFGTKTPGNGKGKEKLDRFIPTRSAMDFDSANYT
LNKDAKQSSDQRDGQGSPSKEDYQKALAASLSVNDSSRILAFKQKAPAAPEGYENNLKSL
YNQNLAPNAAKKQFRHVPTTQERILDAPELMDDYYLNLLDWGSQNLIAVALGRSVYLWNA
GSGNVEELCTVPNEGDYISSLRWGSDGNFLAVGTSDAKVQIWDATRRKQVRELCGHTNRV
SCLSWNGSILSSGSRDSTIANWDVRKRRDEACVATLRVHEQEVCGLTWSLCGQQLASGGN
DNILAIHDASFSLVNKVQAHTAAVKALAWCPYQSNLLATGGGTADRHVRFWNTHTCAMLS
QIDTGSQVCALQWNPHERELLSSHGYSKHQLCLWKYPSLVKVAELSGHQGRVLHMATSPD
GCSVVTAGADETLRFWRPFGEPPAPKDADSKLVAAASGPMATGAAAGFGSLRSIR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgtacagcccccaacgccaggcagcaaggccggtgggagccctggaggcggt
aacaaatccgtcaagctttcgttcgggactaagactcctggaaatggcaagggtaaagaa
aagctagaccgcttcatcccaacacgttcagccatggacttcgattccgccaactacact
cttaacaaggatgctaaacaaagcagtgatcaacgtgacggacagggctcgccatcgaag
gaagattaccagaaggctttggctgcaagcctcagtgtgaatgactcgagccgtatcttg
gcgttcaagcaaaaggcaccagcagctcctgaaggttacgagaataatctgaagtcgcta
tacaaccagaacctcgcgccgaatgcggccaagaagcagttccggcacgtacccacgaca
caggagcgcatccttgatgccccggagctgatggacgattattaccttaacctgctggat
tggggaagccagaacctgatcgccgttgccctcggaaggtctgtttacctgtggaatgct
ggatctggtaacgttgaggagctttgcacggtccccaacgagggcgactacatttcttcc
ttgcggtggggcagcgacggtaatttcctggcagtgggtacgtcggatgccaaggtgcaa
atctgggatgccactaggcgcaagcaggttcgtgagctctgcggacacacgaaccgtgta
tcatgtctgtcgtggaacggctccatcctcagctccggatctcgcgattccaccattgcc
aattgggacgtgcgcaagcgccgtgacgaagcatgcgtcgctacgctacgtgtgcacgag
caggaagtctgtggcctcacttggtcactctgcggacagcagcttgccagcggtggtaat
gacaacatcctggccattcacgatgcttcgttctcccttgtaaacaaggtccaggctcac
acagcagcagtcaaagctctggcttggtgtccttaccagtcaaacctgctagctaccggc
ggcggtaccgcggaccgccacgtgcggttctggaatacgcatacgtgtgccatgctaagt
caaattgacacgggctcacaggtgtgcgctctccagtggaacccacatgagcgcgagctg
ctttcaagccatggttactccaaacaccaactgtgtttgtggaagtaccccagcctggtc
aaggtcgctgagctgtccggccaccagggtcgcgtgctacacatggctacctcgccagac
ggctgcagcgttgtgacagcgggcgcggacgagacattgcggttttggcgaccgtttggt
gagccgcccgccccgaaggatgccgacagcaaactcgtcgcggcggcaagtggaccgatg
gcaacaggcgcagctgcaggctttggtagcctgcgcagtattcgatga
DBGET
integrated database retrieval system
