Volvox carteri f. nagariensis: VOLCADRAFT_127348
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Entry
VOLCADRAFT_127348 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcn03009
]
VOLCADRAFT_127348
Enzymes [BR:
vcn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
VOLCADRAFT_127348
Ribosome biogenesis [BR:
vcn03009
]
Prokaryotic type
ribosomal protein modification factors
VOLCADRAFT_127348
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Mur_ligase_C
TRAM
Motif
Other DBs
NCBI-GeneID:
9621737
NCBI-ProteinID:
XP_002946105
JGI:
127348
UniProt:
D8THN9
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MQFAFRGIPSQLAVPQRRPTRCCAAGVEVPAPTGDKRQQPLGKKVSLVSLGCPKNVVDGE
VLLGDLTRAGFSVTDDHEQSDAIIVNTCAFVEDAKSESLEAIVEAASLNEDGKRRKVVIT
GCLAQRYSDQLASDLPEADLVVGFQKYGNLAASLQRSMGLEPTREALELATAAEAQQQSQ
EEGVTSADAGARGEVAEAGTSGQRVQVGASTVPFRPEWDRYRLTPRHSAYLRVAEGCNHA
CTFCAIPGFRGKFRSKPWQAVLDEARHLVANGVKELNLIAEDTNQYGMDRRDGRDLAQLL
RELSQLEGLHWIRILYAYPSYFNDALIDEIATNPKARVCKYLDMPLQHISNLTLLAMNRP
PREHTLKLLTTLRTRIPSLALRTTFISGFPGETDQQHRELVEFVKTFKFERMGCFAFSEE
DGTPAASLPDQVPQRVRERRRDELISLQQRIGEEWAEGLVGREVEVLVEGYNDDDWLIGR
TQWDAPDVDPLVFLTDSEDPHVAKLEAGQIRRCVITSNSLFDLEATPIV
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttgcttttcgtgggataccgtcgcagctcgctgtgccacagaggcggccgact
cgatgctgcgcggcgggcgtagaggtaccagcaccaacaggcgataagcgtcagcaaccg
ctcggcaaaaaagtctccctcgtttctttaggctgcccgaagaatgttgttgacggtgag
gtgctgctgggtgacctcactcgcgcgggtttctccgtcactgatgaccacgagcagtcc
gacgccatcatcgtcaacacgtgtgccttcgtggaggatgccaagagcgagtctctggag
gctattgtcgaggccgcctccctaaacgaggacggcaagcggcgcaaggtggtcatcacc
ggctgtctggcgcagcggtactcggatcagctagctagcgatcttccggaggcggatctg
gtggtgggtttccagaagtacggcaacctggcggcctccctgcagcggagcatggggctg
gagccaacgcgggaggcactggagctggcgacggcggcggaggcgcagcagcagtcgcag
gaggagggcgtgacgtcagcggatgcgggggcacgcggcgaggtggcggaggcgggcacg
tcgggacagcgggtgcaggtgggagcctccactgttcccttccgccccgaatgggaccgc
taccgactgaccccccggcacagcgcctatctgcgggtggcggaggggtgcaaccacgca
tgcacgttttgcgccatcccgggattcaggggcaagttccggagcaagccctggcaggcc
gtgttggatgaggcgaggcacctggtggccaacggagtgaaggagctcaacctgattgcg
gaggatacaaaccagtacggcatggataggcgtgacggtcgagatctggcgcaactgctt
cgggagctgtcgcagttggagggcctgcactggatccggatcctatatgcctacccgtcg
tatttcaacgacgcgctgattgacgaaattgcaaccaaccccaaggcgcgtgtgtgcaag
tacctggacatgcccctgcagcacatctccaacctgaccctcctggccatgaaccggcca
ccccgggagcacaccctcaagctgctgaccacactgcgcacccgcataccctccctggcg
ctgaggaccaccttcatatcgggattccccggggagacggaccagcagcaccgggagctg
gtggaatttgtgaagacgttcaagttcgagcggatgggttgtttcgcgttcagcgaggag
gacggcactccggccgcctcgctgcctgaccaggtgccccagcgggtgcgggagaggcgg
cgggacgagctgatcagcctgcagcagcgcatcggggaggagtgggcggaagggctggtg
ggccgagaagtggaggtgctggtggagggctacaacgatgacgactggctgatcggtcgt
actcagtgggatgcccctgacgtggacccgctggtgttcttgacggactcggaggacccc
catgtggccaaactggaggctggccaaatacggcgctgcgtgatcacttccaactcgctt
tttgatctggaggcgacgcccatcgtatga
DBGET
integrated database retrieval system
