KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_30886
Entry
VOLCADRAFT_30886  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03082  ATP-dependent chromatin remodeling
vcn03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    VOLCADRAFT_30886
   03083 Polycomb repressive complex
    VOLCADRAFT_30886
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vcn03036]
    VOLCADRAFT_30886
Chromosome and associated proteins [BR:vcn03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     VOLCADRAFT_30886
  Histone modification proteins
   HAT complexes
    HATB complex
     VOLCADRAFT_30886
   HDAC complexes
    Sin3A-HDAC complex
     VOLCADRAFT_30886
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     VOLCADRAFT_30886
    PRC2.2
     VOLCADRAFT_30886
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     VOLCADRAFT_30886
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    VOLCADRAFT_30886
  Chromatin remodeling factors
   NuRD complex
    VOLCADRAFT_30886
   NuRF complex
    VOLCADRAFT_30886
   NuRF complex (fruit fly)
    VOLCADRAFT_30886
SSDB
Motif
Pfam: WD40
Other DBs
NCBI-GeneID: 9625309
NCBI-ProteinID: XP_002945951
JGI: 30886
UniProt: D8TIU0
LinkDB
Position
Unknown
AA seq 458 aa
RWGPKVEDLGYKTKYRAYLSEQVLDGSKPDTLILAHIDVLKPHVASCEAVSNWQERSQAP
HVRIVKTIYHPGEVNKVREIPQHPEVVVTHTDSPQLYVWNMDQQPNRRPQSAGLAAAASS
SSSSSDAPSRPDLVLVGHEDDAPFPLACSAAQPRVGSGGNDQLVLVWDLNDHVSSTLAGR
GGGGGEGTSGRKATELKRGSLTPPSSSNPTPSLLLLGPPFPPPARWRLEGHTATVGDLVF
QPGGSQVLVSVADDGRILTWDLRTGAGGGRGGGGGGDGGATACVLGFVGELADAHGVGVN
VMCVDWCPLDENLLVTGECDHLYHFHAHRTTPASPGHHHHHQQQQSEVIHVEWHPTCKDV
FASGSEDHTIAIWDLSPSRVEAEVNKAKAAAALIFRHLGHRSGRVTDFQWLPSEPWTLIS
VSDNSDDDHNDGTLQVWRIMDLIYRPYEEALAELDQHR
NT seq 1374 nt   +upstreamnt  +downstreamnt
agatgggggcctaaagtcgaagacctgggctataaaaccaagtaccgcgcctatctgtcc
gagcaggtcctggacggctccaaacccgacacgcttattctggcacacatagacgtgctc
aagccccacgtggcctcatgcgaggcggtgtccaactggcaagagaggtctcaggcgccc
cacgtgcgaatcgtcaagacaatctaccacccgggggaggtgaacaaggttcgagagatc
ccgcagcaccccgaggtggtggtcacgcacacggactccccccagctgtacgtatggaac
atggaccaacagcccaacaggcggccgcagtcagcggggctggcggcggcggcgtcctcc
tcctcctcctcctccgacgccccctcccgacccgacctggtgctggtgggccacgaggac
gatgcgcccttccccctggcctgcagcgccgcccagccgcgagtgggcagcggcggtaac
gaccagctggtgctggtgtgggacctgaacgaccacgtgtcatccactctggctgggaga
ggaggaggaggaggagaagggacgtccggaaggaaggcaacggagctaaaacgtgggtcg
ctcactcccccgtcctcctcaaacccgacgccctccttgctactcctgggcccccctttc
ccccccccagctcggtggcgattggagggccacaccgccaccgtgggagacctggtgttc
cagccggggggtagccaggtgctggtcagtgtggcggatgacggccgcatactgacctgg
gacctgaggactggagctggagggggcagaggaggggggggagggggggacggaggggcg
accgcgtgtgttttgggtttcgtgggggagctggcggatgcgcacggagtcggtgtcaat
gtgatgtgcgtggactggtgccccctggacgagaacctgctggtgacgggtgagtgcgac
cacctctaccacttccatgcgcaccgcaccacccccgcctcccccggccatcaccaccac
caccagcagcagcagtcggaggtcatacacgtggagtggcaccccacatgcaaggatgtg
tttgcgagcgggtcggaggaccacaccatcgccatctgggacctgtcgcccagcagggtg
gaggcggaggtcaacaaggcgaaggcggcggcggcactcatcttccgccaccttgggcac
cgatccgggcgagtaaccgacttccagtggctgccctcggagccctggaccctgatcagt
gtgtccgacaacagcgatgatgaccacaacgacggcaccctgcaggtgtggcgcatcatg
gacctcatctacaggccctatgaggaggccctggcggagctggaccaacacagg

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