Volvox carteri f. nagariensis: VOLCADRAFT_40708
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Entry
VOLCADRAFT_40708 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K05016
chloride channel 7
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vcn01009
]
VOLCADRAFT_40708
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcn04131
]
VOLCADRAFT_40708
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vcn04040
]
VOLCADRAFT_40708
Protein phosphatases and associated proteins [BR:
vcn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
VOLCADRAFT_40708
Membrane trafficking [BR:
vcn04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
VOLCADRAFT_40708
Ion channels [BR:
vcn04040
]
Chloride channels
Chloride channel (CLC)
VOLCADRAFT_40708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Voltage_CLC
CBS
DUF5090
Motif
Other DBs
NCBI-GeneID:
9617151
NCBI-ProteinID:
XP_002953983
JGI:
40708
UniProt:
D8U5J5
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
FMVSAGVATALAAFAVNLSVENISGFKFWATLTIMEGGNLLGSFLAYVAMNAALVTASVA
ITLYVGPAAAGSGIPDVKAYLNGVDVPYIFHFNTLVAKVVGAVGSVAGGLAIGKEGPFVH
AGAAIAAIVSQGGSGSARLGWMRHFWNDRDRYDMVACGTAAGVAAAFRSPVGGVLFALEE
MTSWWKNQMLWLAFFTTAVVSVAIRVLMKACSSNGCGFFGSGGFIIFEIQEGQDTYEFFE
LLPMLLLGVLGGLLGSGFIAMNARLSEWRKRNLAPLGRRGRLLEGLAISVLTSTLSFMVP
LLVACTACPPGSEGACPRTDNLHSGNFVKFGCRCAGAYNDLATLFFNTQDDAIRNLFSSK
TKREYTVSALLIFSTIFYFLATLTYGIFAPTGLFVPSILCGAAYGRLVGIFVADMHPGHY
IDEGTYALLGAASFLGGAMRLTVCTCVMLLELTNNLALLPLIMLVLLVAKAVGDGTGIKP
VYEVQMSVKGLPFLQPQPEAFMRHITAKECCGRPPVTFSRVEKVRSLVETLRSNHHNGFP
VMAHGVDGERHICGVVLRQQLLTLLATGNRSMQATPAISENSSRAALSYSVPEFSKPMSD
PVPRCDEGVLAPGALSPETLEMYLDLGPFLNTSYHVVQEDAPLSKIYQLLRTLGLRHICV
IPRCALVVGMITRADLL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
ttcatggtctctgcaggcgtcgccacggcgctggcggcctttgccgtaaacctgagcgtg
gaaaacatcagcggcttcaagttttgggcaacactgaccatcatggagggtggtaacctg
ttgggctccttcctggcgtacgtggccatgaatgccgcgctggtgacggcgtcggtggcc
atcacgctgtacgtgggcccggcggcggcgggctcgggcataccagacgtcaaggcgtac
cttaacggcgtggatgtgccgtacatcttccactttaacaccctagttgccaaagtggtg
ggcgccgtgggcagtgtggctggtgggcttgccatcggaaaggagggtccgttcgtgcat
gcgggcgcggccattgcagcgattgtcagccagggcggctcgggctcggcgaggctgggc
tggatgcggcacttttggaacgaccgcgaccgttacgatatggtggcgtgtgggaccgcc
gccggtgtggccgccgccttccgctccccggtaggcggtgtgctgtttgctctggaggag
atgaccagctggtggaagaaccagatgctgtggctagccttcttcacaacggcagtggtt
tcggtggccatccgggtgctgatgaaggcgtgcagctccaacggctgcggcttctttggg
agcggcggattcattatttttgaaatccaggaggggcaggacacgtatgagttttttgag
ctgttgcccatgctgctactgggggtgctgggcgggttgctgggctcaggcttcatcgcc
atgaatgctcgtctgagcgagtggcgcaagcgcaatctggctccgctgggtcggcgaggt
cggctgctggagggcctggccatcagtgtgctcacctccacactatccttcatggtgccc
ctgctggtcgcctgtacggcctgcccgccaggctcagagggcgcatgtccgcggaccgac
aacctgcactcgggcaactttgtcaagtttgggtgcaggtgcgccggagcttacaacgac
ctggcgacgttgtttttcaacacacaggacgacgccatacgcaacctgttttcatccaaa
acaaagcgcgaatacacggtgtccgcactgctcatcttctcgaccatcttttacttcctg
gccacgctcacgtacggcatcttcgcacccacgggcctcttcgtgccaagcatcctttgc
ggggcggcgtatggcagactggtgggcattttcgtcgcggacatgcatcctgggcactac
atcgatgaaggcacctacgcgttgctaggcgcagcgtccttcttgggtggcgctatgcgc
ctgacagtgtgcacgtgtgtcatgctgctggagctcaccaataacctggcgctgctgccg
ctcatcatgctggtgttgctggtggcaaaggccgtgggtgatggcaccggtatcaagccg
gtgtacgaggtgcagatgtcggtcaaggggctgccctttttgcagccgcagcccgaggcc
ttcatgcgccacatcaccgccaaggagtgctgcggccggccgcccgtcaccttcagcagg
gtcgagaaggtccggtcactcgtagagacactgcgctccaaccatcacaatggcttccct
gtcatggcccacggtgtggatggcgagcgccacatttgtggtgtcgtactgcgtcaacag
ttgctcactctgctggccactggcaaccgcagtatgcaagcaacgccggcgatatcggaa
aacagcagtcgtgcagcgctgtcgtatagtgtgcccgagttctccaagcccatgtcggac
ccggttccccgctgcgacgagggagtactggcacccggggcgctaagcccggagacgctg
gaaatgtacctggacctagggcccttcctcaacacttcgtaccacgtcgtacaggaggac
gcacccctgtccaagatttatcagctgctgcggacgttggggctgcgccatatttgtgtc
atccccaggtgcgctctggttgtaggcatgattacgcgggctgacctgctg
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