Volvox carteri f. nagariensis: VOLCADRAFT_41344
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Entry
VOLCADRAFT_41344 CDS
T01330
Name
(RefSeq) ubiquitin-specific protease 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VOLCADRAFT_41344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_41344
Spliceosome [BR:
vcn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
VOLCADRAFT_41344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
9617875
NCBI-ProteinID:
XP_002946481
JGI:
41344
UniProt:
D8TJP6
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
DEDDDDDDEGADDRVLLPRSTSRAAVKKGTECPYLDTISRQNLDFDFEKCCSVTLSPVNV
YVCLVCGKYFQGRGLNTHAYTHSLESAHHMFMKLDNGKVYCLPDNYEVLDKSLDDIRHVR
DPLFRTEEIASLDNSSSISRLLSYMPGLVGLNNMKNNDYINVIMQICARITPLRDFFLDP
ANYSDCRSPLVQRFGELLRKMWNTRNFKGQVSPHEFVQAVRNASKKRFTADTQCDPVELW
SWLLNNLHLDLTRGKPKKPSIITQCLQGELEVTTLAGTGRGTRAATSGEDVTERVPFLLL
GLELPPAPLFKDVLEKNIIPQVPIFHIMRKFDGETITDDIRAGRRRFRITRLPRYLALHY
RRFTKNNFFIEKNPTLVNFPVKSLELRDILPLPEFPAAAGGAAAGAPDAAAYGSSSKYDL
VANLVHDGKADSGTYRVHVHRKVEDIWYEVQDLAVQDILPQMVALSEAYFQVFE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gacgaggacgacgacgatgacgatgaaggtgcggatgaccgtgtgctgctgccccgcagc
accagtcgtgcggcagtcaagaagggcactgagtgcccctacctggacaccatctcccgc
cagaatttggacttcgattttgagaagtgctgctcggtgactctcagtccggtcaacgtg
tacgtgtgcctggtgtgtgggaagtacttccagggtcgcggtctgaacacccacgcctac
acgcactcgctggagtccgctcaccacatgttcatgaagctggataacggcaaggtgtat
tgcctgccggacaactacgaggtactggataagtcgttggacgacattcgccacgtgcgg
gaccccctgttccgtacggaggagattgccagtctggacaacagtagcagtattagtagg
ctgctctcgtacatgccggggttggtggggctcaacaacatgaagaacaacgactacatc
aacgtcatcatgcagatctgcgcccgcatcactccgctcagggacttcttcctggacccc
gcgaactactcggactgccgcagccccctggtgcagcggtttggagagctgctgcggaag
atgtggaacaccaggaacttcaaaggccaggtctccccgcacgagttcgtacaggcggta
cggaacgcttccaagaagcgatttacggccgatacgcagtgcgaccccgtggagctctgg
tcctggctgctcaacaatctgcatctggacctgacgaggggcaagcccaagaagccgtcc
atcataacgcagtgcctgcagggggagctggaggtgaccacgctggcgggtacgggtagg
ggcacccgggcggccacgagtggggaggacgtcaccgagcgagtgcccttccttctgctg
ggactggagctgccgccggcccccctgttcaaggacgtgctagagaagaacatcatcccg
caggtgcctatcttccacatcatgcgcaaatttgacggcgagaccatcaccgacgacatc
cgggccggccgccgccgcttccgcattacccgcctgcctcgctacctggccctccactac
cgccggtttaccaagaacaacttcttcattgagaagaaccccaccctggtcaatttcccc
gtcaagtctctggagctacgggacatattgccgctgccggagttccccgctgcagcaggc
ggtgcggcggcaggcgcaccggacgcagccgcgtacggcagctcgtccaagtacgacctg
gtagctaacctggtccatgacggcaaggccgacagcggcacctaccgggttcacgtccac
cgcaaagtagaggacatctggtacgaggtgcaggacctggcggtgcaggacatcctacca
cagatggtggcgctatcagaggcgtactttcaagtcttcgaa
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