Volvox carteri f. nagariensis: VOLCADRAFT_42247
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Entry
VOLCADRAFT_42247 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03015
mRNA surveillance pathway
vcn04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
VOLCADRAFT_42247
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
VOLCADRAFT_42247
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vcn01009
]
VOLCADRAFT_42247
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_42247
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_42247
Protein phosphatases and associated proteins [BR:
vcn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
VOLCADRAFT_42247
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
VOLCADRAFT_42247
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
VOLCADRAFT_42247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
9625264
NCBI-ProteinID:
XP_002946173
JGI:
42247
UniProt:
D8TI32
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
QVCELPSMIAYTLFRRLFDEESGSVPRDKLVKFWTGRGLVTAPPAKRAFECLRPDSQNHL
LFQDLWPLLECVLRYHPGLEFLAETQEFQRKYAETVIHRIFYSLNKSGSGRLTFQEFRSG
DLMDALCALDRENDINKILKFFSYEHFYVIYCKFWELDQDHDFLLDKNDLAHYSNCALSY
VIVERIFEEAPRKFKANTPPGKMCYEDFVWFILSEEDKTTDTALTYWFRCVDLDGDGVIR
PREMLYFYEEQLRRLEGWNQEPVQFEDLLCQLHDMLAPAKEGAFTLRDLKRTKPQSGLFF
SALFSLHKFVSFENRDPFAQRAEAAEFAGLSDWDKFAKIEYFR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
caggtatgcgagctgccatccatgatagcatatacgctgttcagaaggctgttcgatgag
gagagtggctcggtgccccgcgacaagctggtcaagttctggacggggcggggactggtg
acggcgccgccagccaagcgggcgttcgagtgcctgaggccggacagccagaatcacttg
ttgtttcaagacttgtggccgttgctggagtgtgtgctgcgctaccacccgggtcttgag
ttcctggccgagacgcaggagttccagcgcaagtacgcggaaacagtcatccaccgcatc
ttctactcgctaaacaagagcggcagcgggcggctcactttccaggagtttcggagcggc
gacctgatggacgcgttgtgtgcgctggaccgggagaatgacatcaacaagatcctcaag
tttttttcgtacgagcacttttacgtcatctactgcaagttctgggagctggaccaggac
cacgacttcctgctggacaaaaacgacctagcgcattactccaattgcgcgttgtcgtac
gtcatcgtggagcgaatctttgaagaggcgccgcgcaagttcaaggccaacactcccccc
ggcaagatgtgctacgaggacttcgtgtggtttatccttagcgaggaggacaagaccacg
gacacagcgctcacttactggttcaggtgtgtggatttggacggcgacggcgtcatacgg
ccccgcgagatgctctacttctacgaggagcagctccggcggctggagggctggaaccag
gagccagtgcagttcgaggacctgctgtgtcagctgcatgacatgctggcgccagcgaag
gagggcgcgttcacactcagggacttgaagcgcacgaagccgcagtcggggctgttcttc
tcagctctgttctcgctgcacaagttcgtcagtttcgaaaaccgcgacccctttgcgcag
cgcgcggaagcggccgagttcgcggggttgtcggattgggacaagttcgccaagatcgaa
tacttcagg
DBGET
integrated database retrieval system