Volvox carteri f. nagariensis: VOLCADRAFT_44340
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Entry
VOLCADRAFT_44340 CDS
T01330
Symbol
pus2
Name
(RefSeq) tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcn03016
]
VOLCADRAFT_44340 (pus2)
Enzymes [BR:
vcn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
VOLCADRAFT_44340 (pus2)
Transfer RNA biogenesis [BR:
vcn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VOLCADRAFT_44340 (pus2)
Prokaryotic type
VOLCADRAFT_44340 (pus2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
9626768
NCBI-ProteinID:
XP_002957319
JGI:
44340
UniProt:
D8UF65
LinkDB
All DBs
Position
Unknown
AA seq
226 aa
AA seq
DB search
GRLSYRMIVSYDGTAYCGWQLQPSAPTVQRFLEGALCTVLREERAVLGVRAAGRTDAGVH
ARGQVVQFSCDKELDVTKMPYKLNSVLPHDIRVLRMSRTAPDFSVTCSALGKCYRYSITN
GETHDPLRHRYALHVRRHLDLAAMRSAAALLTGTHDFSQFSNIGEEGGSPDVQRRRRQRN
PVKTLRRVDVVEGNGFLYKMVRHISGVLVAVGEGKLQTKAVGRMLE
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
ggtcggctaagctaccgcatgattgtatcgtacgatggtacggcatactgcggctggcag
ctgcagccgtcggcgcccaccgtacagcgattcctggagggggccttatgtacggtactc
cgagaggagcgagcggtattgggggtgcgggccgcgggccgtacagatgccggagtgcac
gcgcgtggtcaggttgttcagtttagctgcgacaaggaactcgacgtgaccaagatgccg
tacaaactgaactccgtattgccacacgacattcgtgtactgcgcatgagccgtacggca
cctgattttagcgtcacctgcagcgcgcttggaaagtgctaccgctacagcatcaccaac
ggcgagacacacgacccgctgaggcaccgttacgccctgcacgtgcgccgacatcttgac
ctggccgcgatgcgttccgccgccgccttgctgaccggaactcacgactttagtcagttt
tcaaatattggggaggagggcggcagcccggatgtacagcggcggcgacggcagcgcaat
ccggtcaagacgcttcgtcgagtggatgtggttgaaggcaatggcttcctgtacaagatg
gtacggcacatctcaggggtcctggtggctgtgggggaggggaagctgcagacgaaggcg
gtggggcgcatgttggag
DBGET
integrated database retrieval system
