Volvox carteri f. nagariensis: VOLCADRAFT_45192
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Entry
VOLCADRAFT_45192 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K12890
serine/arginine-rich splicing factor 1
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VOLCADRAFT_45192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcn03041
]
VOLCADRAFT_45192
Spliceosome [BR:
vcn03041
]
Common components
Common spliceosomal components
SR proteins
VOLCADRAFT_45192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PRP38_assoc
RRM_7
Transformer
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
9616603
NCBI-ProteinID:
XP_002955406
JGI:
45192
UniProt:
D8U9V4
LinkDB
All DBs
Position
Unknown
AA seq
245 aa
AA seq
DB search
VFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDQRDAYDAVRGRDGI
EFQGQRLRVEISHGRRGGFGGGGGGGGGGGYGGGGGGGYGGGGPNPYGPSRRTDYRVIVT
GLPISSSWQDLKDHMRRAGEVTFSQVMRDGRGMLGLIDYATREDMETALRKLDGSEFRNP
YDTRRRSSRSKSRSKSRSRSRSKSKSRSRSRSRSRSKSRSRSRDKSRSRSRSPARSKSRS
RSRSR
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgttggcaacttgccgatggatgtacgggagcgagaggttgaggatctcttcttc
aagtacggacgcatacggagcgtggacctgaagattgggcctcgtcctccggcgtttgcc
tttgtcgagtttgaggatcaacgggatgcatacgacgccgttcgcggtcgcgatggaatc
gagtttcagggtcagcgattgcgggtcgagatttcgcatggtcgtcgtggaggctttggg
ggcggtgggggtgggggtggtggcggtggctacggcggcggcggtggcggtggctacggc
ggcggcggtcccaacccatacggtcctagccggcgcacggactatcgagtcatcgtgact
ggactgcccatcagcagctcctggcaggaccttaaggatcacatgcgccgcgcaggcgag
gtgacgttctcgcaggtcatgcgggacggccgtggcatgttgggcctaatcgactacgcc
acgcgggaagacatggaaacggcgctacgtaagctggacggtagtgagttccgcaaccca
tacgatacccggcgacgtagcagtcgcagcaagagccggagcaagagccgcagcaggtcg
cgtagcaagagtaagagccgcagcaggtcgcgctcccgcagccgcagcaaaagtcgttcg
cgcagccgggacaagagccgcagtaggtcgcggtcgcctgcccgcagcaagagccgttcg
cgcagccgaagcagg
DBGET
integrated database retrieval system