KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_47527
Entry
VOLCADRAFT_47527  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    VOLCADRAFT_47527
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vcn03021]
    VOLCADRAFT_47527
   03036 Chromosome and associated proteins [BR:vcn03036]
    VOLCADRAFT_47527
Transcription machinery [BR:vcn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     VOLCADRAFT_47527
   Coactivators
    SAGA/TFTC/STAGA complex
     VOLCADRAFT_47527
Chromosome and associated proteins [BR:vcn03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     VOLCADRAFT_47527
    STAGA complex
     VOLCADRAFT_47527
    TFTC complex
     VOLCADRAFT_47527
    SAGA complex
     VOLCADRAFT_47527
    SLIK complex
     VOLCADRAFT_47527
SSDB
Motif
Pfam: TFIID_20kDa
Other DBs
NCBI-GeneID: 9620381
NCBI-ProteinID: XP_002947555
JGI: 47527
UniProt: D8TM96
LinkDB
Position
Unknown
AA seq 89 aa
MDRDYVVDPATESALLEFYTEWIGNAVALGCEVAKRRKSNILKARDIALHLERSWNLYVP
GFNGEMLKPYRRPHASELHRQRQLAVRRT
NT seq 267 nt   +upstreamnt  +downstreamnt
atggatcgtgactacgtggtcgatccagctactgaatcggcgctgttggagttctacacg
gagtggatcggcaacgcggtggctctgggctgcgaggtggccaagcgacgcaagtcgaat
atcctcaaggctcgcgacatcgcgctgcacctggagcgttcctggaatctgtatgtccct
ggcttcaacggggaaatgctgaagccgtaccgccggccgcacgcatcggaattgcaccgg
caacggcagttggcggtgcggcgaacg

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