Volvox carteri f. nagariensis: VOLCADRAFT_55730
Help
Entry
VOLCADRAFT_55730 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K14848
ribosome assembly protein RRB1
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcn03009
]
VOLCADRAFT_55730
Ribosome biogenesis [BR:
vcn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
VOLCADRAFT_55730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
CAF1C_H4-bd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_SCAP
MIOS_WD40
WDR90_beta-prop_4th
WD40_RFWD3
SH3-A_UBE2O
FCP1_C
Motif
Other DBs
NCBI-GeneID:
9617469
NCBI-ProteinID:
XP_002946643
JGI:
55730
UniProt:
D8TJM9
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
VWRPGIDPVDEDEELAYDPTAYDCLHRFEVDWPCLSFDILKDDLGGPRSSFPHTVYLVCG
TQAATARQNYVAFLKLAQLGQGRHGKKSAAEDDDDSDASDDDDDDSSDDGEGSSSELPAT
FHYRRIAMPCGVNRVRAMPQQPALVAVWGDNGQVRLIDGSKLVSDLAAETEPTAATAKGK
GGGVGKPLELRPLATHSHSAEGFALDWSSARPGRLASGDNRHKIHVWEPSEGGKWSVGGA
HVGHEGAVEDLQWSPSEETVFASCGTDRSIRIWDARERGRPMLTAAEAHGTDVNVISWNR
GVSYMLASGADDGCLRIWDLRTFASSSSSSATSGGGNPAAGPAHVAQFTYHRSHVTSVEW
CPYEGSMLASCSADNQLAVWDLALERDPEEEAALAPEGNAAAPEDLPAQLLFLHAGQSDP
KELHWHPQIPGLLVSTAGDGFNLFKAANM
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgtggcgtccgggcatcgaccctgtggacgaggatgaggagctggcctatgacccaacc
gcgtacgactgcctgcaccgcttcgaagtggactggccatgcctaagcttcgatatcctc
aaagatgacctgggcgggccacgcagctccttcccccatacagtttacctggtctgtggc
actcaggcggcaaccgcccgacaaaactacgttgccttccttaaactggcgcagttgggg
caaggtcgtcatggcaagaaatcagccgcggaggacgacgatgactcggacgcttctgac
gatgatgacgacgacagtagtgacgatggcgagggcagcagcagcgagctgcccgccacg
tttcactaccgccgcatcgcaatgccgtgtggagtgaatcgcgtccgggcgatgccacag
cagccggcgctggtggcggtgtggggtgacaacgggcaggtacggctcattgacggctcc
aagctggtttcagatttggcggctgagacggagcccactgctgccaccgccaagggcaaa
ggaggcggtgtgggcaagccgctggaactcaggccgttggccacacacagtcactcggct
gagggcttcgcgctggactggtcgtcggcgcggcctggtcggctggcctccggcgacaac
cgccacaagattcacgtgtgggagccctcggaaggggggaagtggtcggttggcggggcg
catgtgggtcacgagggggctgtggaggacctccagtggagcccctcagaggagacggtg
tttgcctcctgtggcaccgaccgctccatccgtatctgggacgccagggaacgcggacgg
cccatgctgacggcggcggaggcgcacggcaccgacgtcaacgtcatttcctggaaccgc
ggcgtatcgtacatgctcgcgtcgggcgctgacgacggctgcttgcgcatctgggacctg
cgcacctttgcgtcgtcgtcatcgtcttcggcaacttctggcgggggaaaccctgctgcg
ggtcctgcccacgtggcccagttcacgtaccaccggagtcacgtgacgagtgtagagtgg
tgcccctacgaaggcagcatgttggcgtcttgctcagcggacaaccaactggcggtgtgg
gatctggcgctggagcgcgaccccgaggaggaggctgctctggcgcccgagggtaacgcc
gcggcccccgaggacctgccggctcagctgctgtttctccacgcgggccagagcgatccc
aaggagctccactggcacccgcagatacccggactcctggtatccactgcaggagatggc
ttcaacctgttcaaggcggccaacatgtag
DBGET
integrated database retrieval system