KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_55730
Entry
VOLCADRAFT_55730  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K14848  ribosome assembly protein RRB1
Organism
vcn  Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcn03009]
    VOLCADRAFT_55730
Ribosome biogenesis [BR:vcn03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    VOLCADRAFT_55730
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 CAF1C_H4-bd Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st ANAPC4_WD40 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_SCAP MIOS_WD40 WDR90_beta-prop_4th WD40_RFWD3 SH3-A_UBE2O FCP1_C
Other DBs
NCBI-GeneID: 9617469
NCBI-ProteinID: XP_002946643
JGI: 55730
UniProt: D8TJM9
LinkDB
Position
Unknown
AA seq 449 aa
VWRPGIDPVDEDEELAYDPTAYDCLHRFEVDWPCLSFDILKDDLGGPRSSFPHTVYLVCG
TQAATARQNYVAFLKLAQLGQGRHGKKSAAEDDDDSDASDDDDDDSSDDGEGSSSELPAT
FHYRRIAMPCGVNRVRAMPQQPALVAVWGDNGQVRLIDGSKLVSDLAAETEPTAATAKGK
GGGVGKPLELRPLATHSHSAEGFALDWSSARPGRLASGDNRHKIHVWEPSEGGKWSVGGA
HVGHEGAVEDLQWSPSEETVFASCGTDRSIRIWDARERGRPMLTAAEAHGTDVNVISWNR
GVSYMLASGADDGCLRIWDLRTFASSSSSSATSGGGNPAAGPAHVAQFTYHRSHVTSVEW
CPYEGSMLASCSADNQLAVWDLALERDPEEEAALAPEGNAAAPEDLPAQLLFLHAGQSDP
KELHWHPQIPGLLVSTAGDGFNLFKAANM
NT seq 1350 nt   +upstreamnt  +downstreamnt
gtgtggcgtccgggcatcgaccctgtggacgaggatgaggagctggcctatgacccaacc
gcgtacgactgcctgcaccgcttcgaagtggactggccatgcctaagcttcgatatcctc
aaagatgacctgggcgggccacgcagctccttcccccatacagtttacctggtctgtggc
actcaggcggcaaccgcccgacaaaactacgttgccttccttaaactggcgcagttgggg
caaggtcgtcatggcaagaaatcagccgcggaggacgacgatgactcggacgcttctgac
gatgatgacgacgacagtagtgacgatggcgagggcagcagcagcgagctgcccgccacg
tttcactaccgccgcatcgcaatgccgtgtggagtgaatcgcgtccgggcgatgccacag
cagccggcgctggtggcggtgtggggtgacaacgggcaggtacggctcattgacggctcc
aagctggtttcagatttggcggctgagacggagcccactgctgccaccgccaagggcaaa
ggaggcggtgtgggcaagccgctggaactcaggccgttggccacacacagtcactcggct
gagggcttcgcgctggactggtcgtcggcgcggcctggtcggctggcctccggcgacaac
cgccacaagattcacgtgtgggagccctcggaaggggggaagtggtcggttggcggggcg
catgtgggtcacgagggggctgtggaggacctccagtggagcccctcagaggagacggtg
tttgcctcctgtggcaccgaccgctccatccgtatctgggacgccagggaacgcggacgg
cccatgctgacggcggcggaggcgcacggcaccgacgtcaacgtcatttcctggaaccgc
ggcgtatcgtacatgctcgcgtcgggcgctgacgacggctgcttgcgcatctgggacctg
cgcacctttgcgtcgtcgtcatcgtcttcggcaacttctggcgggggaaaccctgctgcg
ggtcctgcccacgtggcccagttcacgtaccaccggagtcacgtgacgagtgtagagtgg
tgcccctacgaaggcagcatgttggcgtcttgctcagcggacaaccaactggcggtgtgg
gatctggcgctggagcgcgaccccgaggaggaggctgctctggcgcccgagggtaacgcc
gcggcccccgaggacctgccggctcagctgctgtttctccacgcgggccagagcgatccc
aaggagctccactggcacccgcagatacccggactcctggtatccactgcaggagatggc
ttcaacctgttcaaggcggccaacatgtag

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