Volvox carteri f. nagariensis: VOLCADRAFT_55838
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Entry
VOLCADRAFT_55838 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K10865
double-strand break repair protein MRE11
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03440
Homologous recombination
vcn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VOLCADRAFT_55838
03450 Non-homologous end-joining
VOLCADRAFT_55838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcn03032
]
VOLCADRAFT_55838
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_55838
DNA replication proteins [BR:
vcn03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
VOLCADRAFT_55838
DNA repair and recombination proteins [BR:
vcn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
VOLCADRAFT_55838
BRCA1-C complex
VOLCADRAFT_55838
NHEJ (non-homologous end-joining)
MRX complex
VOLCADRAFT_55838
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Motif
Other DBs
NCBI-GeneID:
9622030
NCBI-ProteinID:
XP_002946502
JGI:
55838
UniProt:
D8TIU9
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
LRILISTDNHLGVWEKDETRRDDSFRTFEEVLQLAVEKRVDTVLLGGDLFHENKPSRSTL
VKAIQLLSKYCLNDRPIRFRILSDQSVNFVSGRVNFENPNLNIGLPVFTIHGNHDDPAGQ
DSLSAVDILSQTGLVNYFGKHVRGGAARITLSPVLIEKGSTRLCLYGLGNIRDERLGRSF
QTPGCVQWQRPASTPGYPSDCWINMFVLHQNRVQHTAFAKACVREEHLPPFLDLVVWGHE
HECRQAGGWVFGFGRYIVQPGSSVATALSEGESRPKHALLLEVKGTNFRLQKFRLRTVRP
FEFESVALRDVQPPLKPEDTEEVTRFLTAKVGATEVHQRRYRRDGGNPDSAPLLPLIRLR
VDYTGFSTVNSQRLGQRFVGKVANPHDMLQWTKAPARSRRDEEGAYLRPDALDQSRIEDL
IRQHLGPNALEVLLG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ctgcgaatcctcatatcaactgacaaccacctgggtgtctgggagaaggacgagacccgc
cgcgatgactcctttcgcacctttgaggaggtcctccagctggcggtggagaagcgggtg
gacactgtgctgctggggggcgacctcttccacgagaacaagcccagtcgcagcaccctg
gtcaaggccatacagctgctgtccaagtactgcctgaacgacaggcccatacggttccgg
atcttgtccgatcagagcgtaaacttcgtgtcgggccgcgtcaacttcgagaaccccaat
ctgaacatcggtctgccggtgttcaccatccacggcaaccacgacgaccccgcggggcag
gactccctgtccgcggtggacatcctgtcacagaccggtctggtcaactacttcgggaag
cacgtgaggggcggtgcagctcggatcaccttgtccccggtcctcattgaaaagggctcc
actcggctgtgcctgtacggcctgggcaacatccgggacgagcggctgggtcgctccttc
cagaccccgggctgtgtgcagtggcagcgccccgcctccactccgggctacccctccgac
tgctggatcaacatgttcgtgctgcaccagaaccgggtgcagcacaccgccttcgccaag
gcctgtgtgcgggaggagcacctgccgcccttcctggacctggtcgtgtggggacatgaa
cacgagtgcaggcaagcagggggatgggtatttgggtttgggcgctacatcgtgcagccg
gggtcctccgtggccacggcgctgtcagaaggtgagtcgcggcccaagcacgccctgttg
ttggaggtgaagggaaccaacttccggctgcagaagttccgattgcgcaccgtgcggccg
tttgagttcgagagtgtggcgctgagggacgtgcagccgccgctgaagcccgaggacacg
gaggaggtgacgaggttcctcaccgccaaggtaggcgcgacggaggtacaccagcggagg
taccgccgggatgggggcaaccccgactccgcgccgctgctgccgctcattcggctgcgg
gtggactacacgggcttctccaccgtcaactcgcagcggctgggtcagcggttcgtgggc
aaggtggccaatccgcacgacatgctgcagtggacgaaggcgcccgcgaggagccggcgg
gacgaggagggcgcgtacctgcgaccggatgccctggaccagagccggatcgaagacctc
atacggcaacacctggggcctaatgctctggaggtgctgctggggtag
DBGET
integrated database retrieval system