KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_55838
Entry
VOLCADRAFT_55838  CDS       T01330                                 
Name
(RefSeq) hypothetical protein
  KO
K10865  double-strand break repair protein MRE11
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn03440  Homologous recombination
vcn03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    VOLCADRAFT_55838
   03450 Non-homologous end-joining
    VOLCADRAFT_55838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcn03032]
    VOLCADRAFT_55838
   03400 DNA repair and recombination proteins [BR:vcn03400]
    VOLCADRAFT_55838
DNA replication proteins [BR:vcn03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    VOLCADRAFT_55838
DNA repair and recombination proteins [BR:vcn03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     VOLCADRAFT_55838
    BRCA1-C complex
     VOLCADRAFT_55838
   NHEJ (non-homologous end-joining)
    MRX complex
     VOLCADRAFT_55838
SSDB
Motif
Pfam: Mre11_DNA_bind Metallophos
Other DBs
NCBI-GeneID: 9622030
NCBI-ProteinID: XP_002946502
JGI: 55838
UniProt: D8TIU9
LinkDB
Position
Unknown
AA seq 435 aa
LRILISTDNHLGVWEKDETRRDDSFRTFEEVLQLAVEKRVDTVLLGGDLFHENKPSRSTL
VKAIQLLSKYCLNDRPIRFRILSDQSVNFVSGRVNFENPNLNIGLPVFTIHGNHDDPAGQ
DSLSAVDILSQTGLVNYFGKHVRGGAARITLSPVLIEKGSTRLCLYGLGNIRDERLGRSF
QTPGCVQWQRPASTPGYPSDCWINMFVLHQNRVQHTAFAKACVREEHLPPFLDLVVWGHE
HECRQAGGWVFGFGRYIVQPGSSVATALSEGESRPKHALLLEVKGTNFRLQKFRLRTVRP
FEFESVALRDVQPPLKPEDTEEVTRFLTAKVGATEVHQRRYRRDGGNPDSAPLLPLIRLR
VDYTGFSTVNSQRLGQRFVGKVANPHDMLQWTKAPARSRRDEEGAYLRPDALDQSRIEDL
IRQHLGPNALEVLLG
NT seq 1308 nt   +upstreamnt  +downstreamnt
ctgcgaatcctcatatcaactgacaaccacctgggtgtctgggagaaggacgagacccgc
cgcgatgactcctttcgcacctttgaggaggtcctccagctggcggtggagaagcgggtg
gacactgtgctgctggggggcgacctcttccacgagaacaagcccagtcgcagcaccctg
gtcaaggccatacagctgctgtccaagtactgcctgaacgacaggcccatacggttccgg
atcttgtccgatcagagcgtaaacttcgtgtcgggccgcgtcaacttcgagaaccccaat
ctgaacatcggtctgccggtgttcaccatccacggcaaccacgacgaccccgcggggcag
gactccctgtccgcggtggacatcctgtcacagaccggtctggtcaactacttcgggaag
cacgtgaggggcggtgcagctcggatcaccttgtccccggtcctcattgaaaagggctcc
actcggctgtgcctgtacggcctgggcaacatccgggacgagcggctgggtcgctccttc
cagaccccgggctgtgtgcagtggcagcgccccgcctccactccgggctacccctccgac
tgctggatcaacatgttcgtgctgcaccagaaccgggtgcagcacaccgccttcgccaag
gcctgtgtgcgggaggagcacctgccgcccttcctggacctggtcgtgtggggacatgaa
cacgagtgcaggcaagcagggggatgggtatttgggtttgggcgctacatcgtgcagccg
gggtcctccgtggccacggcgctgtcagaaggtgagtcgcggcccaagcacgccctgttg
ttggaggtgaagggaaccaacttccggctgcagaagttccgattgcgcaccgtgcggccg
tttgagttcgagagtgtggcgctgagggacgtgcagccgccgctgaagcccgaggacacg
gaggaggtgacgaggttcctcaccgccaaggtaggcgcgacggaggtacaccagcggagg
taccgccgggatgggggcaaccccgactccgcgccgctgctgccgctcattcggctgcgg
gtggactacacgggcttctccaccgtcaactcgcagcggctgggtcagcggttcgtgggc
aaggtggccaatccgcacgacatgctgcagtggacgaaggcgcccgcgaggagccggcgg
gacgaggagggcgcgtacctgcgaccggatgccctggaccagagccggatcgaagacctc
atacggcaacacctggggcctaatgctctggaggtgctgctggggtag

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