Volvox carteri f. nagariensis: VOLCADRAFT_56931
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Entry
VOLCADRAFT_56931 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VOLCADRAFT_56931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcn03009
]
VOLCADRAFT_56931
Ribosome biogenesis [BR:
vcn03009
]
Eukaryotic type
Pre-60S particles
GTPases
VOLCADRAFT_56931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
GTP_EFTU_D2
EF-G_D2
EFG_III
EFL1
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
9620392
NCBI-ProteinID:
XP_002947572
JGI:
56931
UniProt:
D8TMC4
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
RVRNLCILAHVDHGKTTLSDHLIGSNGLIHPRMQGELRYLDSREDEQARGITMKASAISL
LYLSSGYLINLIDSPGHVDFCSEVSTAARLSDGALVVVDAVEGVCIQTHAVLRQAYEEKV
KPVLVINKLDRLILELRLTPEEAYGRLRSIVTHANMILSAFASERYLREADAVLAEEEEE
EEEGDAFDPVAGSVAFGSAADGWAFRLDQFAEMYAEKLGCKTEALVRGLWGDWAFSPKDK
RVVRTSRKGGGAGGGKLKPMFVQFALEPIWKAYSVCDPGEDVGGVLGAIVRSRGLGGLVP
TKALEHPDPRQALRSVLRAWLPLSEAVLGMAAAQLPSPAAAAPVRAPRLLGGPPGSPPPP
GLPLHAAQELARLEACVARSDASASAPLVVYVSKMVAVPRGLLPRAPGEGAAGALTHGSH
SQDPQEEVFLGFGRVFSGTARPGQRVHVLNGAYNPAAPTCQRQTAVLGAVYMMMGRALER
VQQVPAGNVLAMAGLDTAVLKSATLSSTPACRPLASLMFQAAAIVMVAVEPAHPSDLPAL
LRGLQLLNRADPFVEISVLDSGEHVLGAAGEVHLGTCLKDLRERFAKVDLRVSPPLVAFR
ESVFCPSELPEGAPLGGLVGGLRAPRVVEATTPNGVCVVRVRAAALPGGVAGALDGRPEL
LRRVLVDGEGWQADASSSCSSSAPSASATLVSELEALRGELRAAAKAAGPQHEARILQML
ERAWLLGPKRIGPNLLLVPSRRANGEDGHLYDSVDGAAGPVAGEATTSCRANGGECGVSE
PLGHVVASVESGVVAGFQIATSSGPLCEEPLWGVAFELEVRLQQPQQAGGSQADVYGPFS
GQVMTAVALACRTAVLEADARLVEAQYLCQLTASAEALSGMYAVLGRRRARILREEMREG
SDTFLVSCYLPAEASFGLADEMRRRSSGAASASLLLSHWERLQVDPFFAPTTEEEREEHG
EDASGLTNLARRLIDAVRRRKGLPVEEKVVARATKQRTLKRNV
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
cgcgtccgcaacttgtgcatcttggctcacgtggaccatggcaagaccaccttgtcagac
cacctcatcggttcgaacggcctcatccatccccggatgcagggtgagctgcgctacctg
gacagccgcgaggatgagcaggcccggggcatcaccatgaaggcatcagccatcagcctg
ctgtatctgtcctccggctacctgatcaatctgatcgactcccccgggcatgtggacttc
tgctccgaggtgtccactgcggcacgactcagcgacggggcgctggtggtggtggacgcg
gtggaaggcgtgtgcatccagacgcatgccgtactacggcaggcgtacgaagagaaggtg
aagcccgtgctggtgatcaataaactggacaggctcattttggagcttagactcaccccc
gaagaggcgtacggcagactgcggagcattgtgacgcacgccaacatgatcctgtcggcc
tttgccagcgagcgctaccttcgggaggcggatgcggtgctggcagaggaggaggaggag
gaggaggagggcgacgcgttcgacccggtggctggcagtgttgcgtttggcagtgcagct
gacggctgggcttttcgactggaccagtttgccgagatgtacgctgagaagctggggtgc
aagacggaggcattggttcgggggctgtggggcgactgggcgttcagccccaaggacaag
cgcgtggtcaggacgtctcgcaaaggtggcggagctggcggaggtaaattgaagcccatg
tttgtgcagtttgctttggagcccatttggaaggcgtacagtgtttgcgatccaggggag
gatgtgggcggggtgctgggggccatcgtgaggtcccgggggctggggggcctggtaccc
accaaggcgcttgagcatcccgacccgcgacaggcattgaggtccgtgctccgcgcctgg
ctgccgctgtccgaggcggttctgggtatggcggccgcacaactccccagtccggcagcc
gcagctccggtccgtgccccccggctgctgggagggccccctggctccccaccgccaccg
ggactgcccctgcatgcggcacaggagctggcgcgactggaggcgtgtgtggcacgcagc
gacgcatcggcttctgctcccctagtggtgtacgtgtccaagatggtggcggtgccccgg
gggctgctgcccagggctccgggggagggcgcggccggtgcgctgacccatgggtcacac
tcccaagacccacaggaagaggtgttcctgggcttcgggcgcgtcttcagcggcacggcc
cgtcccggccagagggtgcacgtgctgaatggtgcctacaaccccgcggccccaacctgc
cagcgtcagactgccgtactgggggctgtgtatatgatgatggggagagctctggagagg
gtacagcaggtccccgccggtaacgtgctcgcaatggccgggctggacactgcggtgctc
aagtcggccaccctgtcctccacccccgcatgccggcccctggcctccctgatgtttcag
gcggcagcgattgtgatggtagctgtggagcctgcccaccccagtgatctgccggcgctg
ctccgcggcttgcagttgctgaaccgggctgaccctttcgtggagatcagtgttctggac
agtggcgagcacgtgttgggtgctgccggcgaagttcatctgggcacgtgcctcaaggac
ctcagggagcggttcgccaaagtggacctgagggtatccccgccgctggtggccttccgc
gagtcggtcttctgcccctccgagctgcccgagggcgcccccctgggagggctggtgggg
ggcctgcgagccccgcgggtggtggaggccaccacacccaacggcgtgtgtgtggtgcgg
gtgcgggcggcggcgctgcccggcggtgtggcgggggcgttggatgggcggcctgagctg
ctgaggagggtgctggtggatggagagggctggcaagccgacgcttcgtcttcttgctcc
tcctccgcgccgagtgcatctgcaaccttggtttcggagctggaggccttacggggtgag
ctgcgggcggccgcaaaggcggcggggccgcagcacgaagcgcggattttgcagatgcta
gagcgcgcgtggttgctggggcccaagcgcatagggcccaacttactcctggtgccgtca
aggagagccaacggggaagacgggcacttgtacgacagcgttgatggcgccgcagggccg
gtggcgggggaggcgacgacgtcatgcagagccaacggcggggaatgtggagtttcggag
ccacttggtcatgtagtggcgagtgtggagtcgggtgtagtggcgggcttccagatcgct
acttcgtcaggtcctctttgcgaggagcccctttggggcgttgccttcgaactcgaagta
cgtctgcagcagccgcagcaagccggcggtagccaggcagatgtgtacggaccgttctcg
ggacaggtaatgacggcagtagcattggcgtgtcggacggcagtcctggaggcggatgca
cgcctggtggaggcgcagtatctgtgccagcttactgcgagtgcggaggcgcttagcggc
atgtatgcagtgctaggtcgccgccgtgctcgcatcctgagggaagagatgcgggaaggc
agcgacaccttcctggtcagctgctaccttcccgcggaggcctccttcggcctggcggat
gagatgaggcgccggagctccggtgcggcttccgcctccctcctgctgagccactgggaa
cggctgcaggtggaccccttcttcgcccccactacggaggaggagcgcgaggaacacgga
gaggacgcctcgggcctgactaacttagccaggaggctcattgacgcagtacggcggcgg
aagggtctgccggtggaggagaaggtggtggctcgggccacaaagcaacgtaccctcaaa
cgaaacgtgtga
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integrated database retrieval system