Volvox carteri f. nagariensis: VOLCADRAFT_57553
Help
Entry
VOLCADRAFT_57553 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcn03400
]
VOLCADRAFT_57553
Enzymes [BR:
vcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VOLCADRAFT_57553
DNA repair and recombination proteins [BR:
vcn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
VOLCADRAFT_57553
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Motif
Other DBs
NCBI-GeneID:
9620884
NCBI-ProteinID:
XP_002947997
JGI:
57553
UniProt:
D8TNF9
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MQHQDQLRIRRDQLLRQIDQERRAPKADWQQEGFPWSAKLNQTLHDVFGLREFRALQREV
MNAALQGRDVLCLLPSGGGKSLCYQLPALVSPGLTLVVSPLLSLIQDQVLSLRALSINGS
CLTSLSSKEEVAEVYGKMERGELKLLYVTPEKIVSSKRFMSKLEKVHQGGRLDRIAIDEA
HCASAWGNDFRPDYKKLGVLKQQFPQVPIIALTATATHQVCKDLKSILRIQGCEFFRASV
NRPNLFYEVLPKPAAAADAIAAIVAWIHRHYPRGESGIVYCLTRKDCETVASELAAGGVS
ARHYHADMEPGPREAAHAAWSAGKVQVMVATVAFGMGINKPDVRFVVHHSLSKSLENYYQ
AGSRLIESGRAGRDGLPARCLMFYRFSDALRQAAIVCFEPTWEANLNAMMLYAAAAVPGS
GSGDSGDGGSSCRRAIIQRHFAEAPAECRCMCDNCCAAAAAGPAAAAPRDVGRHARAVLE
ILRQQQAKEKKATLIQLVDLWRSSKDPGVAKEAKTMSRDENEAVIAAMTYARLLEFEFGH
TAYATNAYLSAPTATAKGKKAKAAATASFDDGASSGGGSDGTTRASLEQWRAQRATDLHL
FPHSILSAEQLSALSALQKPVSQDALRAAVGVRRFELYGRELTDVL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccaggaccagctgcgcattagacgggatcaactcctccgtcagatcgatcag
gaacgccgtgcacccaaggcagattggcaacaggaaggctttccctggagcgctaagctc
aaccagactctgcatgacgtgtttggacttcgcgaattcagggcgctgcaacgcgaggtc
atgaacgcggcgctgcagggccgtgacgtgctgtgcctgctccccagtggaggcggcaag
agcctctgctaccagctgccggcgttggtcagcccgggactgacgctggtggtgtcgccg
ctgctgtctctcatccaggaccaggtgttgtccctgcgtgccctgagcattaacggcagc
tgcctgaccagcctcagcagcaaagaggaggtggcggaggtgtacggcaagatggagcgc
ggggagctcaagctgctctacgtgacaccagaaaagattgtgtcgtccaagcgatttatg
agcaagctggagaaggtgcatcagggggggaggctggaccgtatcgccatcgacgaggca
cactgcgccagcgcctggggcaatgattttcggccggactacaagaagctgggggtcctc
aaacagcagtttcctcaggtgcccatcatcgccctcacggccaccgccacccaccaggtg
tgcaaggacctcaaatccattctgcgcatccaaggctgcgagtttttccgcgcctccgtt
aatagacccaacctcttctacgaggtgctgcccaagcccgcagcggcagcggacgccatc
gccgccattgtggcgtggattcaccggcactatccacgtggcgagtcgggcattgtgtac
tgcctcacgaggaaggactgcgagacggtggcttcggagctggcggcaggtggcgtttcc
gcccggcattaccacgccgatatggagcctgggccgcgggaggcagcgcacgccgcctgg
agcgcggggaaggtgcaggtgatggtggcgacggtggcgtttggcatgggcatcaacaag
cccgacgtccgcttcgtggtgcatcactcgctgagcaagtccctcgagaactactaccag
gcagggtcccgtctaattgagtccggacgtgctggcagagacggcttgcccgcgcggtgt
ctcatgttctacaggttctctgatgcgctccgtcaggccgccatcgtctgttttgaaccg
acgtgggaggccaacttgaacgccatgatgttgtacgcggctgcggcggtacctggctcc
ggcagtggtgacagcggcgacggaggaagcagctgccgccgtgccatcatccagcgccat
ttcgcggaggctcctgcggagtgcaggtgcatgtgcgacaactgttgcgcggctgcggct
gcggggccggcggcagctgctccgagagatgtgggccgtcacgcgcgggcggtgctcgag
atcctgcgccaacagcaggccaaggagaagaaggccaccctcatccagctggtggacctc
tggcgcagcagtaaggacccaggggtcgccaaggaggccaagacgatgagccgcgatgag
aacgaggcggttatcgccgccatgacctatgcgcggctgctggagttcgagtttggccac
acggcctacgccaccaacgcatatctgagcgcgccaacggcaacggcaaagggcaagaaa
gccaaggcggcagccactgcatcttttgacgatggcgccagcagcggcggtggcagtgat
ggtaccacccgagcatccctggagcagtggcgcgcacagcgggcaactgacctgcacttg
ttcccgcattccatcttgtctgcggagcagctgtcggcgctgagcgcgctgcagaagccg
gtgtcgcaggacgcgctccgcgcggcggtaggcgtacgacgtttcgagttgtacggcaga
gagctgacggatgtgctc
DBGET
integrated database retrieval system
