KEGG   Volvox carteri f. nagariensis: VOLCADRAFT_58274
Entry
VOLCADRAFT_58274  CDS       T01330                                 
Symbol
arpC1
Name
(RefSeq) actin-related protein ArpC1
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
vcn  Volvox carteri f. nagariensis
Pathway
vcn04144  Endocytosis
vcn04517  IgSF CAM signaling
vcn05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:vcn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    VOLCADRAFT_58274 (arpC1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    VOLCADRAFT_58274 (arpC1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    VOLCADRAFT_58274 (arpC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vcn04131]
    VOLCADRAFT_58274 (arpC1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:vcn04812]
    VOLCADRAFT_58274 (arpC1)
Membrane trafficking [BR:vcn04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    VOLCADRAFT_58274 (arpC1)
Cytoskeleton proteins [BR:vcn04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     VOLCADRAFT_58274 (arpC1)
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd eIF2A Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_WDR36-Utp21_1st WDR55
Other DBs
NCBI-GeneID: 9627331
NCBI-ProteinID: XP_002948644
JGI: 58274
UniProt: D8TQE4
LinkDB
Position
Unknown
AA seq 196 aa
MTSSVQHTRLPGPIQAIAWNRDCTSIAVSHLSNDLSHASHDVIIYEITFTPAGQLSWSKV
AVLKGHEQLVSGLHWAPGSDQILSCSYDRNAFGGRVSGPPAAAQGPWEKQMVITRLTKGA
LCVRWSPSETKFAIGSAARVVSVGYYDKESNWWACKMIRKAHESSVVCVSWHPNSLLLAT
GSTDKRVRLFNAYMDG
NT seq 588 nt   +upstreamnt  +downstreamnt
atgacttcctcagtacagcatacgcgcttgcctggtccaatccaagcaatagcttggaac
cgggactgtaccagcattgcagtatcgcacttatcgaacgatttatcacacgcatcccac
gatgtcataatctatgagatcacctttacaccagcaggacagctatcatggtcaaaggtc
gctgtcctcaaaggccacgaacagctggtctccggcctacactgggccccaggttcagat
cagatcctctcctgctcttacgaccgcaacgccttcgggggcagggtatcggggccacct
gctgcggcccaggggccatgggagaagcagatggtgattacgcggctgaccaagggggcc
ttatgtgtgcgatggagtccctccgaaaccaagtttgcaatcggcagcgcggccagggtc
gtgtcagtggggtactacgacaaggagagcaactggtgggcctgcaagatgatccgcaag
gcccacgagagcagtgtcgtgtgtgtttcctggcaccccaactcgctgttgctagccacc
ggttctacggataaaagggtgcgcctgttcaacgcgtacatggacggt

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