Volvox carteri f. nagariensis: VOLCADRAFT_58274
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Entry
VOLCADRAFT_58274 CDS
T01330
Symbol
arpC1
Name
(RefSeq) actin-related protein ArpC1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn04144
Endocytosis
vcn04517
IgSF CAM signaling
vcn05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
VOLCADRAFT_58274 (arpC1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
VOLCADRAFT_58274 (arpC1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
VOLCADRAFT_58274 (arpC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcn04131
]
VOLCADRAFT_58274 (arpC1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vcn04812
]
VOLCADRAFT_58274 (arpC1)
Membrane trafficking [BR:
vcn04131
]
Others
Actin-binding proteins
Arp2/3 complex
VOLCADRAFT_58274 (arpC1)
Cytoskeleton proteins [BR:
vcn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
VOLCADRAFT_58274 (arpC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
eIF2A
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WDR55
Motif
Other DBs
NCBI-GeneID:
9627331
NCBI-ProteinID:
XP_002948644
JGI:
58274
UniProt:
D8TQE4
LinkDB
All DBs
Position
Unknown
AA seq
196 aa
AA seq
DB search
MTSSVQHTRLPGPIQAIAWNRDCTSIAVSHLSNDLSHASHDVIIYEITFTPAGQLSWSKV
AVLKGHEQLVSGLHWAPGSDQILSCSYDRNAFGGRVSGPPAAAQGPWEKQMVITRLTKGA
LCVRWSPSETKFAIGSAARVVSVGYYDKESNWWACKMIRKAHESSVVCVSWHPNSLLLAT
GSTDKRVRLFNAYMDG
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgacttcctcagtacagcatacgcgcttgcctggtccaatccaagcaatagcttggaac
cgggactgtaccagcattgcagtatcgcacttatcgaacgatttatcacacgcatcccac
gatgtcataatctatgagatcacctttacaccagcaggacagctatcatggtcaaaggtc
gctgtcctcaaaggccacgaacagctggtctccggcctacactgggccccaggttcagat
cagatcctctcctgctcttacgaccgcaacgccttcgggggcagggtatcggggccacct
gctgcggcccaggggccatgggagaagcagatggtgattacgcggctgaccaagggggcc
ttatgtgtgcgatggagtccctccgaaaccaagtttgcaatcggcagcgcggccagggtc
gtgtcagtggggtactacgacaaggagagcaactggtgggcctgcaagatgatccgcaag
gcccacgagagcagtgtcgtgtgtgtttcctggcaccccaactcgctgttgctagccacc
ggttctacggataaaagggtgcgcctgttcaacgcgtacatggacggt
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integrated database retrieval system