Volvox carteri f. nagariensis: VOLCADRAFT_58949
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Entry
VOLCADRAFT_58949 CDS
T01330
Symbol
pcgA
Name
(RefSeq) polycomb group protein
KO
K11462
polycomb protein EED
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
VOLCADRAFT_58949 (pcgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcn03036
]
VOLCADRAFT_58949 (pcgA)
Chromosome and associated proteins [BR:
vcn03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
VOLCADRAFT_58949 (pcgA)
PRC2.2
VOLCADRAFT_58949 (pcgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WDR55
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
9623767
NCBI-ProteinID:
XP_002948960
JGI:
58949
UniProt:
D8TRH8
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
CSLQEDHREPIFCVTFNNFDMAHRDVFATVGQHRVRVRARGRRGSEAGSGGGAEGDIGEK
FYCCKWSVDEESGAALLLLAGEKALVRVLDVSRGYLVHTFAGHGKVINDIAVHPSRPRLF
LSAAEDESIRLWNIRSRTCVAIFAGEGGHRNKVLSLDFHPWDGERFLSAGMDNAVKIWSL
APIERLIDESDAAVDGCVDSGEGGVATAAGLRRAFPTRVVQQPLFSTLQVHNDYVDCVRW
LGDLVLSKSVHDVITLWRPGGHELHLRPPPNPSSSPMQNFKLSDSHRTWFVRFSCDVQYS
VLACGSARGKVFVFSLLATTLAGTEGAPRAKLTAPQCKVVVRQTAVSYDGTTILASCDDG
SVHRWDRDNSMEVVP
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
tgcagcctccaggaggaccatcgcgagcctatcttttgcgtcaccttcaacaactttgat
atggcccaccgggatgttttcgccaccgtggggcaacaccgggtgcgtgtccgggcacgc
ggccggaggggttccgaagccggcagtggaggtggggccgaaggggacatcggtgagaag
ttttactgctgcaagtggtcggtagacgaggaaagcggcgcggcgttgctgctgcttgcc
ggggagaaggcgctggtgcgggtgctggacgtcagccgcggctacctagtgcatacgttt
gcaggccacggcaaggtcatcaacgacattgccgtacaccccagtcgtccgcgcctcttc
ctatcagcagctgaagacgaaagcatacgactgtggaacatccggtcccgcacttgcgtt
gcgatatttgcgggcgaaggcggtcaccgcaacaaggtgctcagcttggacttccaccct
tgggacggtgaacgtttcttgtccgccggaatggataacgcagtcaagatatggagcttg
gcgcccattgagcgactgatcgacgagtcggatgcggccgtggatggctgcgtggacagt
ggcgagggcggcgtcgccacggcggcgggcttacggcgggcctttcccacacgcgtcgta
cagcaaccattgttttccacgttgcaggtccataatgactacgttgactgcgtgcgttgg
ctgggggacttggtgctctcaaaatccgtacatgacgtcattacgttatggcgacccggg
ggacacgagcttcacttgcgtcctcctcccaacccctcatcttctcccatgcagaatttt
aagttgtccgatagccatcgtacctggtttgtccgcttttcctgcgacgtgcagtattct
gtgctggcgtgcggcagcgccaggggcaaagtgttcgttttctcgctgctcgccactaca
ctggctggcaccgaaggggcaccaagggccaagttaaccgcaccgcagtgcaaagtggtg
gtacgacagacggcagttagctatgacggcactaccatcctggccagctgcgatgatggc
tccgtgcaccgctgggatcgggacaacagtatggaggtggtcccatga
DBGET
integrated database retrieval system