Volvox carteri f. nagariensis: VOLCADRAFT_59582 Help Entry VOLCADRAFT_59582  CDS       T01330                                  Name (RefSeq) hypothetical protein   KO K10844   DNA excision repair protein ERCC-2 [EC:5.6.2.3] Organism vcn  Volvox carteri f. nagariensis Pathway vcn03022   Basal transcription factors vcn03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:vcn00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     VOLCADRAFT_59582   09124 Replication and repair    03420 Nucleotide excision repair     VOLCADRAFT_59582  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vcn03021]     VOLCADRAFT_59582    03036 Chromosome and associated proteins [BR:vcn03036]     VOLCADRAFT_59582    03400 DNA repair and recombination proteins [BR:vcn03400]     VOLCADRAFT_59582 Enzymes [BR:vcn01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      VOLCADRAFT_59582 Transcription machinery [BR:vcn03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIIH      VOLCADRAFT_59582 Chromosome and associated proteins [BR:vcn03036]  Eukaryotic type   Centrosome formation proteins    Spindle formation proteins     VOLCADRAFT_59582 DNA repair and recombination proteins [BR:vcn03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TFIIH complex      VOLCADRAFT_59582 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD_2 Helicase_C_2 HBB ResIII DEAD AAA_22 AAA_19 nSTAND3 AAA_34 AAA_11 Motif Other DBs NCBI-GeneID:  9618915 NCBI-ProteinID:  XP_002949637 JGI:  59582 UniProt:  D8TTF2 LinkDB All DBs Position Unknown AA seq 780 aa AA seqDB search MKFNLEGLTVYFPYEYIYPEQYRYMLELKRALDARGHCLLEMPTGTGKTITLLSLITSYQ LAHKEVGKLIYCTRTVPEMEKVLAELAELIDYRAKYLGRGPGSNEILALGLSSRKNLCIH PRVAEEGSRESVDAGCRRLTASWVRERAAERGARGGEGGAEEGGSGGSVADIELCDFFEG HERAGVEALLPPGVYTLSDLRDFGRKRGWCPYFLARHMMAFANVVVYNYQYMIDPKVSQM VSRELEKECVVVFDEAHNIDNVCIEALSVNLRKQTLEAAGRNLGKLSNSIRRAREADAAR LQGEYNRLVAGLVAQGALRGGEDWLANPALPEDVVQETVPGNIRRAEHFMGFLNRFLAFL REKMASPVVTSQTPQVFLQELQERVQVDAKTLKFCYDRLSSLLKTLEITNTDEFTPIQLV ADFATLVGTYAKGFAIIMEPYDERLPQVPDPVLQLSCLDASLAMKPVFSKFQSVVITSGT LSPIDLYPRILNFNPVAIQSFQMTLTRDCLCPVVVTRGADQMPMSTKFEMRGDPGVMRNY GRLLVELSAVVPDGIVAFFVSYRYMDQIISKWHDMGILQEIMQHKLIFIETQDVVETTLA LDNFRRACDSGRGAVFLSVARGKVAEGIDFDRHYGRAVVMFGVPYQYTLSRILRARLEYL RETFQIKENDYLAFDAVRQAAQCVGRVIRSKADYGMMIFADKRYQRHDKRDKLPQWITRH LKEAHMNLSTDMMVHVAREFLRAMAQPYDRGAVGKSLLSEAALAALDATGGLDGAIASGA NT seq 2343 nt NT seq  +upstreamnt  +downstreamnt atgaaatttaatttggagggcctgacggtgtactttccatatgagtacatttatcctgag caataccgttatatgttggagctaaagagagcattggacgcccgtgggcactgcctgctg gagatgcccacgggcaccggcaagaccatcacgctgttgtcgctcattaccagctaccag ctagcgcacaaggaggtgggaaagctcatctattgcactcgaacagtgccggagatggag aaggtcctggccgagctggcggaacttattgactaccgcgccaagtacctgggccgggga cccggatccaatgagattcttgcgctgggtctgtcctctcggaagaacctttgcatccac ccccgggtggcagaggagggctccagggagagcgtcgatgccgggtgccgccgcctgacc gcgtcgtgggtgcgtgagcgtgcagcggagcggggtgcgcgtggcggcgagggaggcgcc gaggagggtggcagtggtggcagcgtggcggatattgagctttgtgacttctttgaggga catgagcgagctggagtggaggccctattgccaccaggcgtgtacacgctgtctgacctg cgtgactttggccgcaagcgtgggtggtgtccgtacttcctggcccgccacatgatggct tttgccaacgtcgtggtgtacaactaccagtacatgattgaccccaaggtttcacagatg gtgtcgcgagagcttgagaaggaatgcgtggtggtgttcgacgaggcgcacaacattgat aacgtgtgtattgaggcgctttcagtcaacctgcggaagcagaccctggaggcggcgggg aggaacctgggcaaactgagcaattccattcgtcgcgcccgtgaagccgatgcggccagg ttgcagggcgagtataatcggctggtggcagggcttgtcgcacagggtgcgctccggggg ggcgaagactggctggcgaaccctgcgctgccggaagatgtcgtgcaagagacagtgcca ggtaatattcggcgcgctgagcactttatgggcttcctgaaccggttcctagctttcctg cgcgagaagatggcttcgccagtggtaaccagtcagacgccccaggtgttcctccaggag ctccaggaacgggtgcaagtagacgccaagacactcaagttctgttatgaccggctcagc tcgttgctcaagaccctggagattacgaacacggacgagttcacgccgatccagttggtg gcggatttcgccaccctggtggggacgtacgccaagggcttcgccatcatcatggaaccc tacgacgagcggctgccccaggtacccgaccccgtgctgcagctgtcctgtctggacgcc agtctggcgatgaagcccgttttctcaaaattccagtcggttgtcatcaccagcggcact ctgagtccgatcgacttgtacccgcgcatcctgaacttcaatccagtggccatccagtcc ttccagatgaccctcacacgggattgcttgtgcccggttgtggtgacgaggggagctgac cagatgcccatgtccacgaagtttgagatgcggggggatcctggcgtgatgcgcaattac gggcggttgctcgtggagctgtcggctgtggtaccggacggcatcgtcgcgttcttcgtt tcgtaccgctacatggaccagatcatctccaagtggcacgacatgggcatcctgcaggag attatgcagcataaactaattttcatcgagacgcaggatgtggtggagacgactctggcg ctggacaacttccggcgagcgtgcgacagcggccgaggagcggtcttcctgtccgtggcg agggggaaggtggctgagggcattgactttgatcgtcattacggtcgtgctgtggtcatg ttcggcgtaccgtaccagtacacgctcagccgcattttgcgggcccgtttagagtatttg cgcgagacgttccagattaaggagaacgactacctcgccttcgacgcagtgcgccaggcg gcacagtgcgtaggacgcgttatccgcagcaaggcggactacggcatgatgatatttgct gataagcgttaccagcgccacgacaagcgcgacaagttgccgcagtggatcacgaggcat ctcaaggaggcgcacatgaacctgtccacggacatgatggtgcacgtggcccgggaattc ctccgcgctatggcacagccctatgaccgcggtgccgttggcaagagcctcctcagcgag gcagcactggcagccctggacgcaactggagggctggatggagctattgcatccggggcg tga

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