Volvox carteri f. nagariensis: VOLCADRAFT_59832
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Entry
VOLCADRAFT_59832 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
vcn
Volvox carteri f. nagariensis
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcn03009
]
VOLCADRAFT_59832
04121 Ubiquitin system [BR:
vcn04121
]
VOLCADRAFT_59832
Enzymes [BR:
vcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
VOLCADRAFT_59832
Ribosome biogenesis [BR:
vcn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
VOLCADRAFT_59832
Ubiquitin system [BR:
vcn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
VOLCADRAFT_59832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBC_like
zf-RING_2
FANCL_C
zf-RING-like
zf-ANAPC11
zf-rbx1
C1_1
RINGv
zf-RING_16
FtrD-like
PHD
TPR_5
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
9619048
NCBI-ProteinID:
XP_002949978
JGI:
59832
UniProt:
D8TU53
LinkDB
All DBs
Position
Unknown
AA seq
161 aa
AA seq
DB search
MRSSSRQALKPPSGGGGRFSVRASPSSPEVVATLEVEDGAVLELVVKLPACMPLRAPEVE
CRRKVGLNEARLRKWLLSIASFLRYQNGSVADAIALWKRNIDSEFEGVEACLICYSVFSS
VGGQLPRLVCRTCNVRFHPACLYKWFKSAGKSQCPHCQALW
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcctcctcccgacaggctctgaaaccccctagtggaggcggcggccgcttttca
gtacgcgcctccccgtcctcgccagaggtcgtggcgacgctggaggtggaggacggcgcc
gtgctggagctggtggtgaagctgcccgcctgcatgccgcttcgtgctccggaagtcgag
tgccgcagaaaggtcggcctgaatgaggcgcgtctacgcaagtggctgctgtccatcgca
agctttctgcgctaccaaaatggctccgtagcggacgccatcgcgctctggaaacgcaac
atcgacagcgagttcgagggcgtggaggcgtgcctgatctgctactcggtgttctcctcc
gtcggcggccagctgccgcgcctggtgtgccgtacgtgcaatgtgcgcttccaccctgca
tgtctgtacaagtggttcaagagcgccgggaagagtcagtgcccgcactgccaagcgctg
tggtag
DBGET
integrated database retrieval system
